RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DISC1C4P0D8 188 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 H3BMQ9 156 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 CD74P04233 296 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 FGF2P09038 288 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 KLK9Q2XQG4 91 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 UNQ9165/PRO28630Q6UXU0 137 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 CCDC71LQ8N9Z2 235 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 RNASE11Q8TAA1 199 aaKnown RBP13.35□□□□□ -0.27
COL6A1-204ENST00000486023 VN1R17PQ8TDU5 208 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 WDR89Q96FK6 387 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-204ENST00000486023 ZNF486Q96H40 463 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-204ENST00000486023 FAM212BQ9NTI7 297 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-204ENST00000486023 KLK9Q9UKQ9 250 aa13.35□□□□□ -0.27
COL6A1-204ENST00000486023 ZNF785A8K8V0 405 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 TGOLN2O43493 480 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 CD7P09564 240 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 RND3P61587 244 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 MRPS10P82664 201 aaKnown RBP13.34□□□□□ -0.27
COL6A1-204ENST00000486023 OR2K2Q8NGT1 345 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 MCFD2Q8NI22 146 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 SCARB1Q8WTV0 552 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 PINX1Q96BK5 328 aaKnown RBP13.34□□□□□ -0.27
COL6A1-204ENST00000486023 ISOC1Q96CN7 298 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 NEURL2Q9BR09 285 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 PALMDQ9NP74 551 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 SLC2A8Q9NY64 477 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 C21orf62Q9NYP8 219 aa13.34□□□□□ -0.27
COL6A1-204ENST00000486023 C14orf166Q9Y224 244 aaKnown RBP13.34□□□□□ -0.27
COL6A1-204ENST00000486023 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-204ENST00000486023 TMEM213A2RRL7 107 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 FABP12A6NFH5 140 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 SCAF4O95104 1147 aaKnown RBP13.33□□□□□ -0.28
COL6A1-204ENST00000486023 IFNA17P01571 189 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 IGKV1-5P01602 117 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 AKAIN1P0CW23 69 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
COL6A1-204ENST00000486023 ERHP84090 104 aaKnown RBP13.33□□□□□ -0.28
COL6A1-204ENST00000486023 MEF2DQ14814 521 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 ZNF57Q68EA5 555 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-204ENST00000486023 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 CADM3Q8N126 398 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 DEFB125Q8N687 156 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 BCL7BQ9BQE9 202 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 C20orf24Q9BUV8 137 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
COL6A1-204ENST00000486023 MLXQ9UH92 298 aa13.33□□□□□ -0.28
COL6A1-204ENST00000486023 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
COL6A1-204ENST00000486023 ATG12O94817 140 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 CTSDP07339 412 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-204ENST00000486023 TNFSF8P32971 234 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 SSBP1Q04837 148 aaKnown RBP13.32□□□□□ -0.28
COL6A1-204ENST00000486023 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 RRNAD1Q96FB5 475 aaKnown RBP13.32□□□□□ -0.28
COL6A1-204ENST00000486023 THAP7Q9BT49 309 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-204ENST00000486023 CHRDL1Q9BU40 450 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 PDCD10Q9BUL8 212 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 SLIRPQ9GZT3 109 aaKnown RBP13.32□□□□□ -0.28
COL6A1-204ENST00000486023 WFDC10AQ9H1F0 79 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
COL6A1-204ENST00000486023 K7EIM0 57 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 ETV6P41212 452 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 PRCDQ00LT1 54 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
COL6A1-204ENST00000486023 OR2C3Q8N628 320 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 SLC35G3Q8N808 338 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 OR51S1Q8NGJ8 323 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 OR1P1Q8NH06 330 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-204ENST00000486023 MCUBQ9NWR8 336 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
COL6A1-204ENST00000486023 A0A0B4J293 547 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 OR11H12B2RN74 326 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 ST8SIA3O43173 380 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 YIF1AO95070 293 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 OR5AC1P0C628 307 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 SNCAP37840 140 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 HAGHQ16775 308 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 TMEM61Q8N0U2 210 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 RTBDNQ9BSG5 229 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-204ENST00000486023 RSL24D1Q9UHA3 163 aaKnown RBP13.3□□□□□ -0.28
COL6A1-204ENST00000486023 NBEAL2Q6ZNJ1 2754 aa13.3□□□□□ -0.28
COL6A1-204ENST00000486023 A8MWP6 167 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 A8MZ25 164 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 CTDSPLO15194 276 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 MT-CO2P00403 227 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 ZNF436Q9C0F3 470 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-204ENST00000486023 NAA60Q9H7X0 242 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 ENY2Q9NPA8 101 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 MRPL27Q9P0M9 148 aaKnown RBP13.29□□□□□ -0.28
COL6A1-204ENST00000486023 RABL2AQ9UBK7 228 aaPredicted RBP13.29□□□□□ -0.28
COL6A1-204ENST00000486023 RABL2BQ9UNT1 228 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 STAB2Q8WWQ8 2551 aa13.29□□□□□ -0.28
COL6A1-204ENST00000486023 A0A0G2JRQ6 117 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 HOXA1P49639 335 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms