RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PKIGQ9Y2B9 76 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 TONSLQ96HA7 1378 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 MED13Q9UHV7 2174 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 MAST2Q6P0Q8 1798 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 PSMD12O00232 456 aaPredicted RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 CHP2O43745 196 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 MRPS14O60783 128 aaKnown RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 IGKV1-5P01602 117 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 PMP2P02689 132 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 CLPSP04118 112 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 METTL15P1P0C7V9 234 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 UBBP0CG47 229 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 CD79AP11912 226 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H1TP22492 207 aaPredicted RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BOP23527 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BBP33778 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BDP58876 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 PSME3P61289 254 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 SNRPD2P62316 118 aaKnown RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BCP62807 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HBA1P69905 142 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 ITGB3BPQ13352 177 aaPredicted RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 ZNF345Q14585 488 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST2H2BEQ16778 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 UNQ6190/PRO20217Q6UXQ8 127 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 DCXRQ7Z4W1 244 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 RPS19BP1Q86WX3 136 aaKnown RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 C20orf196Q8IYI0 205 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 Q8N2B8 174 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 LRRC25Q8N386 305 aaPredicted RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 OR8J2Q8NGG1 315 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 C10orf105Q8TEF2 133 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 RASSF5Q8WWW0 418 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 C11orf40Q8WZ69 217 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BHQ93079 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 OR52E6Q96RD3 313 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BNQ99877 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H2BMQ99879 126 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 RETNLBQ9BQ08 111 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 ADAT1Q9BUB4 502 aaKnown RBP0.79□□□□□ -2.28
GCFC2-209ENST00000486016 FBXL12Q9NXK8 326 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 RALGAPA2Q2PPJ7 1873 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 MYH11P35749 1972 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 SETD5Q9C0A6 1442 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 GLI3P10071 1580 aa0.79□□□□□ -2.28
GCFC2-209ENST00000486016 LAMB2P55268 1798 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 IGKV3D-7A0A0C4DH55 119 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 IGKV3OR2-268A0A0C4DH90 116 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 SMIM23A6NLE4 172 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 FAAHO00519 579 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 HLA-DRB1P01911 266 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 RPL5P46777 297 aaKnown RBP0.78□□□□□ -2.28
GCFC2-209ENST00000486016 RUNX1Q01196 453 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 CDK5R1Q15078 307 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 KCNJ8Q15842 424 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 ACOT6Q3I5F7 207 aaPredicted RBP0.78□□□□□ -2.28
GCFC2-209ENST00000486016 RPL22L1Q6P5R6 122 aaKnown RBP0.78□□□□□ -2.28
GCFC2-209ENST00000486016 C15orf53Q8NAA6 179 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 MCFD2Q8NI22 146 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 TMEM106AQ96A25 262 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 YIPF3Q9GZM5 350 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 PRTFDC1Q9NRG1 225 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 MRPL27Q9P0M9 148 aaKnown RBP0.78□□□□□ -2.28
GCFC2-209ENST00000486016 VPS29Q9UBQ0 182 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 FREM1Q5H8C1 2179 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 BAZ2BQ9UIF8 2168 aaKnown RBP0.78□□□□□ -2.28
GCFC2-209ENST00000486016 MTUS2Q5JR59 1369 aa0.78□□□□□ -2.28
GCFC2-209ENST00000486016 WRNQ14191 1432 aaPredicted RBP eCLIP0.78□□□□□ -2.28
GCFC2-209ENST00000486016 IGKV2-40A0A087WW87 121 aaPredicted RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 CLDN24A6NM45 220 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 TMEM212A6NML5 194 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 LYPLA2O95372 231 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 IGKV2D-40P01614 121 aaPredicted RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 RPS17P08708 135 aaKnown RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 DEFA1P59665 94 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 KRTAP10-4P60372 401 aaPredicted RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 MYL6P60660 151 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 RPS20P60866 119 aaKnown RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 STX5Q13190 355 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 ZNF846Q147U1 533 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 SURF2Q15527 256 aaPredicted RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 SPANXN3Q5MJ09 141 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 LCN15Q6UWW0 184 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 BPIFA4PQ86YQ2 179 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 ANKRD29Q8N6D5 301 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 CLDN22Q8N7P3 220 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 WFDC11Q8NEX6 87 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 OR13C4Q8NGS5 318 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 PFN4Q8NHR9 129 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 CCDC42Q96M95 316 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 TSPAN32Q96QS1 320 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 NIPSNAP1Q9BPW8 284 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 COMMD5Q9GZQ3 224 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 C11orf68Q9H3H3 251 aaKnown RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 SOX21Q9Y651 276 aaPredicted RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 V9GYY5 206 aaPredicted RBP0.77□□□□□ -2.29
GCFC2-209ENST00000486016 TTC21AQ8NDW8 1320 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 HEATR5AQ86XA9 2040 aa0.77□□□□□ -2.29
GCFC2-209ENST00000486016 IGKV3-7A0A075B6H7 116 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms