RNA–Protein interactions for RNA: ENST00000485798.5

NUCB1-211, Transcript of nucleobindin 1, human

TSL 3

Gene NUCB1, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUCB1-211	ENST00000485798	VN1R17P	Q8TDU5	208 aa		11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	RBPMS	Q93062	196 aa	Known RBP	11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	IL22RA2	Q969J5	263 aa		11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	TMEM230	Q96A57	120 aa		11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	CCDC140	Q96MF4	163 aa		11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	TMEM56-RWDD3	S4R434	201 aa		11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.59	□□□□□ -0.55
NUCB1-211	ENST00000485798	COL7A1	Q02388	2944 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	LINC00299	Q6ZSB3	139 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	SGPP2	Q8IWX5	399 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	OR2C3	Q8N628	320 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	OR1P1	Q8NH06	330 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	RRNAD1	Q96FB5	475 aa	Known RBP	11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	OR4C12	Q96R67	309 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	HINT2	Q9BX68	163 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798	KCNIP3	Q9Y2W7	256 aa		11.58	□□□□□ -0.56
NUCB1-211	ENST00000485798		A0A0B4J293	547 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	MFSD2B	A6NFX1	497 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	GGCT	O75223	188 aa	Known RBP	11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	IGLV1-51	P01701	117 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	SYNJ2BP	P57105	145 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	IL34	Q6ZMJ4	242 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	LHFPL5	Q8TAF8	219 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	ZNF502	Q8TBZ5	544 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	PEMT	Q9UBM1	199 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	SORL1	Q92673	2214 aa		11.57	□□□□□ -0.56
NUCB1-211	ENST00000485798	PIGBOS1	A0A0B4J2F0	54 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798		A0A0G2JRQ6	117 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	NAP1L6	A6NFF2	107 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	LGALS9	O00182	355 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	ARL3	P36405	182 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	MECP2	P51608	486 aa	Known RBP	11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	MFAP2	P55001	183 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	SUPT4H1	P63272	117 aa	Known RBP	11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	SRPX	P78539	464 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	TMEM187	Q14656	261 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	BAK1	Q16611	211 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	GPHB5	Q86YW7	130 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	SELENOH	Q8IZQ5	122 aa	Known RBP	11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	SDHC	Q99643	169 aa	Predicted RBP	11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	CACFD1	Q9UGQ2	172 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	DNAH9	Q9NYC9	4486 aa		11.56	□□□□□ -0.56
NUCB1-211	ENST00000485798	PPP5D1	E7EU14	171 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	ST8SIA3	O43173	380 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	ANXA3	P12429	323 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	IZUMO4	Q1ZYL8	232 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	TMEM128	Q5BJH2	165 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	TMEM268	Q5VZI3	342 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	TRIQK	Q629K1	86 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	ZNF57	Q68EA5	555 aa	Predicted RBP	11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	SLC25A24	Q6NUK1	477 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	CLEC19A	Q6UXS0	136 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	OR52E5	Q8NH55	327 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	RNASE11	Q8TAA1	199 aa	Known RBP	11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	PDCD10	Q9BUL8	212 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	PLEKHA3	Q9HB20	300 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798	RYR3	Q15413	4870 aa		11.55	□□□□□ -0.56
NUCB1-211	ENST00000485798		A8MWP6	167 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798		K7EIM0	57 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	CSN3	P07498	182 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	AKR1C4	P17516	323 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	FCGR2B	P31994	310 aa	Predicted RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	ERH	P84090	104 aa	Known RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	RBMS2	Q15434	407 aa	Known RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	PVRIG	Q6DKI7	326 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798		Q6ZRM9	215 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	SLC35G3	Q8N808	338 aa		11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	BSCL2	Q96G97	398 aa	Predicted RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	C7orf50	Q9BRJ6	194 aa	Known RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798	LSM4	Q9Y4Z0	139 aa	Known RBP	11.54	□□□□□ -0.56
NUCB1-211	ENST00000485798		A0A0B4J2A0	478 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	DUXB	A0A1W2PPF3	345 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798		A6NHS1	94 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	IFNA17	P01571	189 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	IGHV3-23	P01764	117 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	HLA-A	P01891	365 aa	Known RBP	11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	CLEC3B	P05452	202 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	INPP1	P49441	399 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	SPCS3	P61009	180 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	UBE2M	P61081	183 aa	Known RBP	11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	FAM106A	Q4KMX7	169 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	SPSB3	Q6PJ21	355 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	OR2K2	Q8NGT1	345 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	SCARB1	Q8WTV0	552 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	PRR25	Q96S07	402 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	GAR1	Q9NY12	217 aa	Known RBP	11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798	SHPK	Q9UHJ6	478 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798		S4R3C0	116 aa		11.53	□□□□□ -0.56
NUCB1-211	ENST00000485798		I3L2K1	104 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	TGOLN2	O43493	480 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	OR2C1	O95371	312 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	IL7	P13232	177 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	SPN	P16150	400 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	GPR183	P32249	361 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	BSX	Q3C1V8	233 aa		11.52	□□□□□ -0.57
NUCB1-211	ENST00000485798	NMS	Q5H8A3	153 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms