RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 NAT8BQ9UHF3 227 aa3.84□□□□□ -1.79
SMARCC1-206ENST00000485737 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
SMARCC1-206ENST00000485737 PCSK5Q92824 1860 aa3.84□□□□□ -1.8
SMARCC1-206ENST00000485737 NCKAP5O14513 1909 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 LOC105371242A0A075B767 164 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 IGHV2OR16-5A0A0B4J2B6 119 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 IGLC7A0M8Q6 106 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 HELTA6NFD8 242 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 DPRXA6NFQ7 191 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 GGTLC3B5MD39 225 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 F2RL2O00254 374 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNHIT1O43257 154 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 CGAP01215 116 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 APCSP02743 223 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 FRMD6-AS1P0C7T7 363 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 CCL4P13236 92 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 PMCHP20382 165 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 HNF1AP20823 631 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 TNFSF4P23510 183 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 NPY1RP25929 384 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 SSTR5P35346 364 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 GABRA2P47869 451 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 CEBPDP49716 269 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 DUSP3P51452 185 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 PTTG1IPP53801 180 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 UBE2G1P62253 170 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ARG2P78540 354 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 RHOGP84095 191 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 COTL1Q14019 142 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 C21orf62-AS1Q17RA5 79 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 SMIM21Q3B7S5 101 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 TM4SF20Q53R12 229 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM162BQ5T6X4 162 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 SPATA31B1PQ5VZV4 182 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 PMS2CLQ68D20 193 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 WDR82Q6UXN9 313 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 PQLC2Q6ZP29 291 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 Q6ZR03 302 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ATP5L2Q7Z4Y8 100 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 VASH2Q86V25 355 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 MCEMP1Q8IX19 187 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF439Q8NDP4 499 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF738Q8NE65 137 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 OR4F17Q8NGA8 305 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 OR8B3Q8NGG8 313 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 OR4S2Q8NH73 311 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 C18orf32Q8TCD1 76 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 RNASE8Q8TDE3 154 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 SMIM12Q96EX1 92 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 ZNF503Q96F45 646 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 OR8B2Q96RD0 313 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 MRPL32Q9BYC8 188 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 TTTY12Q9BZ98 90 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 CXXC4Q9H2H0 198 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 SAP30LQ9HAJ7 183 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 SEPSECSQ9HD40 501 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM14BQ9NUH8 114 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 BET1LQ9NYM9 111 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 PILRBQ9UKJ0 227 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 PSG11Q9UQ72 335 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 LOXL2Q9Y4K0 774 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 KIAA2026Q5HYC2 2103 aa3.83□□□□□ -1.8
SMARCC1-206ENST00000485737 MKI67P46013 3256 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 LAMA2P24043 3122 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 SPAG17Q6Q759 2223 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 SEC16AO15027 2179 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 COL27A1Q8IZC6 1860 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 TRAV30A0A087WSZ9 112 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 A0A1B0GXF2 115 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 PSMB11A5LHX3 300 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 C2orf70A6NJV1 201 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 C21orf140B9A014 251 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 INS-IGF2F8WCM5 200 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 J3QR06 171 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 M0R1X1 148 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 CRXO43186 299 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 FCGR3BO75015 233 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 PROP1O75360 226 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 HLA-DRB1P01911 266 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 OTX2P32243 289 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 MAGEA5P43359 124 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 CXCL12P48061 93 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 REG1BP48304 166 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 GNG10P50151 68 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 LOXL3P58215 753 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 TAS2R45P59539 299 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 HSPE1P61604 102 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 PRCDQ00LT1 54 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 AESQ08117 197 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 TMEM177Q53S58 311 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 LRRC10Q5BKY1 277 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM120AOSQ5T036 256 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 IBA57Q5T440 356 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 FAM53AQ6NSI3 398 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 INO80CQ6PI98 192 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 MIR17HGQ75NE6 70 aa3.82□□□□□ -1.8
SMARCC1-206ENST00000485737 DOLPP1Q86YN1 238 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms