RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ZNF429Q86V71 674 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 C12orf45Q8N5I9 185 aaPredicted RBP7.43□□□□□ -1.22
HMG20B-210ENST00000483417 ZNF491Q8N8L2 437 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 RNASE11Q8TAA1 199 aaKnown RBP7.43□□□□□ -1.22
HMG20B-210ENST00000483417 MRAPQ8TCY5 172 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 DUX3Q96PT4 197 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 OR5B12Q96R08 314 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 SPIN2AQ99865 258 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 SPIN2BQ9BPZ2 258 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 GNB4Q9HAV0 340 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 S4R3C0 116 aa7.43□□□□□ -1.22
HMG20B-210ENST00000483417 A0A1B0GU03 582 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 C13orf42A0A1B0GVH6 325 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 ATG12O94817 140 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 IFNA17P01571 189 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 IGHV3-11P01762 117 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 SULT1A3P0DMM9 295 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 SULT1A4P0DMN0 295 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 CDX1P47902 265 aaPredicted RBP7.42□□□□□ -1.22
HMG20B-210ENST00000483417 PRCDQ00LT1 54 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 FOXE3Q13461 319 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 SMCO1Q147U7 214 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 OXA1LQ15070 435 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 AARDQ4LEZ3 155 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 KHDC1LQ5JSQ8 128 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 TMEM170AQ8WVE7 144 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 RAX2Q96IS3 184 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 MAGT1Q9H0U3 335 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 RBKSQ9H477 322 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 PALMDQ9NP74 551 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 COA4Q9NYJ1 87 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 FKBP11Q9NYL4 201 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 ZNF257Q9Y2Q1 563 aa7.42□□□□□ -1.22
HMG20B-210ENST00000483417 TRBV9A0A0B4J1U6 114 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 IGHV3-21A0A0B4J1V1 117 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 WI2-2373I1.2A0A1W2PRP0 233 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 NPIPB5A8MRT5 1133 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 CCL24O00175 119 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 OR2J3O76001 311 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 PTTG1O95997 202 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 IGHV3-48P01763 117 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 IGHV3-23P01764 117 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 TRGV3P03979 118 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 ELANEP08246 267 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 SPCS3P61009 180 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 SRPXP78539 464 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 RGS21Q2M5E4 152 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 OR2C3Q8N628 320 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 KLHL30-AS1Q8NEE0 82 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 OR5B3Q8NH48 314 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 OR1S1Q8NH92 325 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 TMEM68Q96MH6 324 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 GON7Q9BXV9 100 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 GSKIPQ9P0R6 139 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 TMED3Q9Y3Q3 217 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 ALG5Q9Y673 324 aa7.41□□□□□ -1.22
HMG20B-210ENST00000483417 NOTCH3Q9UM47 2321 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 DUXBA0A1W2PPF3 345 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 SNRPGP15A8MWD9 76 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 CREBL2O60519 120 aaPredicted RBP7.4□□□□□ -1.22
HMG20B-210ENST00000483417 TMEM50AO95807 157 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 DHFRP00374 187 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 TRBV12-3P01733 135 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 FGF2P09038 288 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
HMG20B-210ENST00000483417 TPPP2P59282 170 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 RHOGP84095 191 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 ID3Q02535 119 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 TNFRSF9Q07011 255 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 IL15RAQ13261 267 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 TATDN3Q17R31 274 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 KLK9Q2XQG4 91 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 DEFB136Q30KP8 78 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 SLC25A24Q6NUK1 477 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 TMEM65Q6PI78 240 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 ZBTB8BQ8NAP8 495 aaPredicted RBP7.4□□□□□ -1.22
HMG20B-210ENST00000483417 OR4D5Q8NGN0 318 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 OR5M8Q8NGP6 311 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 OR52E5Q8NH55 327 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 HSPB7Q9UBY9 170 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 KLK9Q9UKQ9 250 aa7.4□□□□□ -1.22
HMG20B-210ENST00000483417 IGLV11-55A0A075B6I3 123 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 C7orf66A4D0T2 115 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 ANKRD34BA5PLL1 514 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 NUDT19A8MXV4 375 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 I3L521 148 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 BRI3O95415 125 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 RNASE2P10153 161 aaKnown RBP7.39□□□□□ -1.23
HMG20B-210ENST00000483417 IAPPP10997 89 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 SLC25A6P12236 298 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 PAX9P55771 341 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 POLR2GP62487 172 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMG20B-210ENST00000483417 FHL3Q13643 280 aa7.39□□□□□ -1.23
HMG20B-210ENST00000483417 IAH1Q2TAA2 248 aaPredicted RBP7.39□□□□□ -1.23
HMG20B-210ENST00000483417 UBE2E2Q96LR5 201 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms