RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PRR20EP86478 221 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 PRR20CP86479 221 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 PRR20DP86480 221 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 PRR20BP86481 221 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 PRR20AP86496 221 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 MIR17HGQ75NE6 70 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 OR4P4Q8NGL7 312 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 FAM222BQ8WU58 562 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 TXNDC17Q9BRA2 123 aa12.16□□□□□ -0.46
ATG4B-220ENST00000482507 ICE1Q9Y2F5 2266 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 SRRM4A7MD48 611 aaKnown RBP12.15□□□□□ -0.46
ATG4B-220ENST00000482507 ITGB1BP1O14713 200 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 ACTL6BO94805 426 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 DMRTC2Q8IXT2 367 aaPredicted RBP12.15□□□□□ -0.46
ATG4B-220ENST00000482507 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 TP53TG3Q9ULZ0 132 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
ATG4B-220ENST00000482507 IGLV3-9A0A075B6K5 115 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 IGKV1OR2-108A0A075B7D4 117 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 GRIFINA4D1Z8 144 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 IGKV1-16P04430 117 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 GLRXP35754 106 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.47
ATG4B-220ENST00000482507 RHOBP62745 196 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 NEUROG1Q92886 237 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 MISP3Q96FF7 219 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 GCM1Q9NP62 436 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.47
ATG4B-220ENST00000482507 NDUFB7P17568 137 aa12.14□□□□□ -0.47
ATG4B-220ENST00000482507 CBLN1P23435 193 aa12.14□□□□□ -0.47
ATG4B-220ENST00000482507 YPEL3P61236 119 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-220ENST00000482507 STUMQ69YW2 141 aa12.14□□□□□ -0.47
ATG4B-220ENST00000482507 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
ATG4B-220ENST00000482507 CCL13Q99616 98 aa12.14□□□□□ -0.47
ATG4B-220ENST00000482507 RAI1Q7Z5J4 1906 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-220ENST00000482507 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 SFTPCP11686 197 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-220ENST00000482507 LINC00310P59036 64 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 TIMM23BQ5SRD1 257 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-220ENST00000482507 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 Q9UFV3 132 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 TNCP24821 2201 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 CT45A6P0DMU7 189 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 CT45A5P0DMU8 189 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 CT45A7P0DMV0 189 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 CCKARP32238 428 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 OR5I1Q13606 314 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 MLANAQ16655 118 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 ZNF503Q96F45 646 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 NOL4LQ96MY1 436 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-220ENST00000482507 NCOR1P1Q9H4R4 102 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
ATG4B-220ENST00000482507 IGHV1-46P01743 117 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 CD33P20138 364 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 GATA4P43694 442 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 RAB4BP61018 213 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 POU2AF1Q16633 256 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 TRGV10A0A0A0MS01 117 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-220ENST00000482507 RBPJQ06330 500 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-220ENST00000482507 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 TANC2Q9HCD6 1990 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 PLCE1Q9P212 2302 aa12.12□□□□□ -0.47
ATG4B-220ENST00000482507 J3QR06 171 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 PRB1P04280 392 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 ZNF90Q03938 601 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 UPK2O00526 184 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
ATG4B-220ENST00000482507 BTF3L4Q96K17 158 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
ATG4B-220ENST00000482507 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 C9JCJ5 164 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 LGALS4P56470 323 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 TNFAIP6P98066 277 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-220ENST00000482507 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 PSG5Q15238 335 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 RND1Q92730 232 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 BBC3Q96PG8 261 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-220ENST00000482507 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 CHODLQ9H9P2 273 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 POLR3KQ9Y2Y1 108 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-220ENST00000482507 F2Z2F3 143 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 EREGO14944 169 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 CRYBB3P26998 211 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 SELENOTP62341 195 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 RAB31Q13636 194 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 ZNF788Q6ZQV5 615 aa12.1□□□□□ -0.47
ATG4B-220ENST00000482507 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms