RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 COMMD5Q9GZQ3 224 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 DYSFO75923 2080 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 TRBV9A0A0B4J1U6 114 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 A8MWP6 167 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 OR7C2O60412 319 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 MMP23AO75900 390 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 SELENOTP62341 195 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
C9orf3-218ENST00000482056 CACNG8Q8WXS5 425 aa12.54□□□□□ -0.4
C9orf3-218ENST00000482056 YLPM1P49750 1951 aaKnown RBP12.53□□□□□ -0.4
C9orf3-218ENST00000482056 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
C9orf3-218ENST00000482056 OR5G3P0C626 314 aa12.53□□□□□ -0.4
C9orf3-218ENST00000482056 HLA-DRB5Q30154 266 aa12.53□□□□□ -0.4
C9orf3-218ENST00000482056 TIGITQ495A1 244 aa12.53□□□□□ -0.4
C9orf3-218ENST00000482056 CMTM2Q8TAZ6 248 aa12.53□□□□□ -0.4
C9orf3-218ENST00000482056 HARBI1Q96MB7 349 aa12.53□□□□□ -0.4
C9orf3-218ENST00000482056 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
C9orf3-218ENST00000482056 A0A1W2PN81 502 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 SRRM4A7MD48 611 aaKnown RBP12.52□□□□□ -0.4
C9orf3-218ENST00000482056 SLC17A3O00476 420 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 DLL1O00548 723 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 OR4A8P0C604 315 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.4
C9orf3-218ENST00000482056 LGALS4P56470 323 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 CD69Q07108 199 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 CENPWQ5EE01 88 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 OR1L6Q8NGR2 347 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 RND1Q92730 232 aa12.52□□□□□ -0.4
C9orf3-218ENST00000482056 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.4
C9orf3-218ENST00000482056 OR10J4P0C629 311 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 USF1P22415 310 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-218ENST00000482056 CRYBB3P26998 211 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 TPPP2P59282 170 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 RPL8P62917 257 aaKnown RBP12.52□□□□□ -0.41
C9orf3-218ENST00000482056 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 CCL8P80075 99 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 COX19Q49B96 90 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 MMD2Q8IY49 270 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 OR4A5Q8NH83 315 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 VSTM2AQ8TAG5 236 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 NDUFAF3Q9BU61 184 aa12.52□□□□□ -0.41
C9orf3-218ENST00000482056 MRPL20Q9BYC9 149 aaKnown RBP12.52□□□□□ -0.41
C9orf3-218ENST00000482056 A0A1W2PRE2 83 aa12.51□□□□□ -0.41
C9orf3-218ENST00000482056 C8orf88P0DMB2 117 aa12.51□□□□□ -0.41
C9orf3-218ENST00000482056 CRISP2P16562 243 aa12.51□□□□□ -0.41
C9orf3-218ENST00000482056 ZNF600Q6ZNG1 722 aa12.51□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
C9orf3-218ENST00000482056 FLYWCH2Q96CP2 140 aaKnown RBP12.51□□□□□ -0.41
C9orf3-218ENST00000482056 FAM122AQ96E09 287 aa12.51□□□□□ -0.41
C9orf3-218ENST00000482056 C17orf100A8MU93 164 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 INS-IGF2F8WCM5 200 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 C16orf97H3BN30 126 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 FCN1O00602 326 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 CBLN1P23435 193 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 RANP62826 216 aaKnown RBP12.5□□□□□ -0.41
C9orf3-218ENST00000482056 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 UNQ6494/PRO21346Q6UXR6 183 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
C9orf3-218ENST00000482056 OSTCQ9NRP0 149 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 NDUFA4L2Q9NRX3 87 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 NAGKQ9UJ70 344 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 V9GYV3 84 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 OTOGLQ3ZCN5 2332 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 IGKV1OR2-108A0A075B7D4 117 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 VSTM5A8MXK1 200 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 H0YJW9 148 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 MT-ND6P03923 174 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.41
C9orf3-218ENST00000482056 SSTP61278 116 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 SSX8Q7RTT4 187 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 MOB3BQ86TA1 216 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 OR5AN1Q8NGI8 311 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 SNRNP40Q96DI7 357 aaKnown RBP12.5□□□□□ -0.41
C9orf3-218ENST00000482056 GNB1LQ9BYB4 327 aa12.5□□□□□ -0.41
C9orf3-218ENST00000482056 IER3P46695 156 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 RAB4BP61018 213 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 WFDC8Q8IUA0 241 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 OR4C13Q8NGP0 309 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 OR10X1Q8NGY0 326 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 OR9G1Q8NH87 305 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 WFIKKN1Q96NZ8 548 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 SLC25A33Q9BSK2 321 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 DCAF16Q9NXF7 216 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 ZNRD1Q9P1U0 126 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 DSPP15924 2871 aaKnown RBP12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PPIAL4EA0A075B759 164 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PPIAL4DF5H284 164 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PRRG2O14669 202 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 PPIAL4FP0DN26 164 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 ESDP10768 282 aa12.49□□□□□ -0.41
C9orf3-218ENST00000482056 GATA2P23769 480 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms