RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 TMEM136Q6ZRR5 245 aa11.82□□□□□ -0.52
CCDC78-211ENST00000481804 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
CCDC78-211ENST00000481804 SSBP3Q9BWW4 388 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-211ENST00000481804 C3orf79P0CE67 100 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 AREGP15514 252 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 ZNF134P52741 427 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 COX19Q49B96 90 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 MOB3BQ86TA1 216 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 PCSK5Q92824 1860 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 HSBP1O75506 76 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 OSTCQ9NRP0 149 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 OR51B2Q9Y5P1 312 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 MGST3O14880 152 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 HINT1P49773 126 aaPredicted RBP11.81□□□□□ -0.52
CCDC78-211ENST00000481804 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 MRPS11P82912 194 aaKnown RBP11.81□□□□□ -0.52
CCDC78-211ENST00000481804 RNFT1Q5M7Z0 435 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 C1orf159Q96HA4 380 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 IFI27L2Q9H2X8 130 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 PRO3102Q9H379 93 aa11.81□□□□□ -0.52
CCDC78-211ENST00000481804 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 BOD1L1Q8NFC6 3051 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 TRGV8A0A0C4DH27 118 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 J3QR06 171 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 BMPR1BO00238 502 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 HYPMO75409 117 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 ASPHD1Q5U4P2 390 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 STUMQ69YW2 141 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 STPG4Q8N801 248 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 CDC42EP3Q9UKI2 254 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 CNOT1A5YKK6 2376 aaKnown RBP11.8□□□□□ -0.52
CCDC78-211ENST00000481804 GNG10P50151 68 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 CALYQ9NYX4 217 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 LAMA5O15230 3695 aa11.8□□□□□ -0.52
CCDC78-211ENST00000481804 CECR9P0C854 216 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 IGLC2P0DOY2 106 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 IGLC3P0DOY3 106 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 LCN12Q6JVE5 192 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRR27Q6MZM9 219 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 DSPP15924 2871 aaKnown RBP11.79□□□□□ -0.52
CCDC78-211ENST00000481804 ACP1P24666 158 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 MFAP2P55001 183 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 UBE2L3P68036 154 aaKnown RBP11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRR20EP86478 221 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRR20CP86479 221 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRR20DP86480 221 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRR20BP86481 221 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRR20AP86496 221 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 FER1L6-AS2Q96M78 137 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 SLC25A10Q9UBX3 287 aaPredicted RBP11.79□□□□□ -0.52
CCDC78-211ENST00000481804 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 LNP1A1A4G5 178 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 GGTLC3B5MD39 225 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 PRRX1P54821 245 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 MZT1Q08AG7 82 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 Q56UQ5 140 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 ATP1A1-AS1Q5TC04 95 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 Q6ZT83 130 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
CCDC78-211ENST00000481804 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 SAA2-SAA4A0A096LPE2 208 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 C21orf140B9A014 251 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 ISLRO14498 428 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 SAA2P0DJI9 122 aaPredicted RBP11.78□□□□□ -0.52
CCDC78-211ENST00000481804 RNASEKQ6P5S7 137 aaKnown RBP11.78□□□□□ -0.52
CCDC78-211ENST00000481804 TSKUQ8WUA8 353 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 LINC00869P0C866 280 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 ZNF439Q8NDP4 499 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 MDS2Q8NDY4 140 aa11.78□□□□□ -0.52
CCDC78-211ENST00000481804 CAMPP49913 170 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 VHLLQ6RSH7 139 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 Q8N976 141 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 TMEM178AQ8NBL3 297 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 ZFHX4Q86UP3 3567 aa11.77□□□□□ -0.52
CCDC78-211ENST00000481804 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
CCDC78-211ENST00000481804 M0R2Z0 102 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 MAJINQ3KP22 176 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 UTF1Q5T230 341 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 OR9G1Q8NH87 305 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 FOXA2Q9Y261 457 aaPredicted RBP11.77□□□□□ -0.53
CCDC78-211ENST00000481804 CTRLP40313 264 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 LOXL3P58215 753 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 MLANAQ16655 118 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 VWA1Q6PCB0 445 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 DEFB108BQ8NET1 73 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 NEUROG1Q92886 237 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 LINC00479Q96M42 142 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 PRNDQ9UKY0 176 aa11.77□□□□□ -0.53
CCDC78-211ENST00000481804 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
CCDC78-211ENST00000481804 SLAQ13239 276 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms