RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 BSCL2Q96G97 398 aaPredicted RBP13.84□□□□□ -0.19
CLK1-211ENST00000481641 C20orf24Q9BUV8 137 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 GGTLC1Q9BX51 225 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 NAA50Q9GZZ1 169 aaKnown RBP13.84□□□□□ -0.19
CLK1-211ENST00000481641 TMEM14BQ9NUH8 114 aa13.84□□□□□ -0.19
CLK1-211ENST00000481641 LOC102724200A0A096LPH7 203 aaPredicted RBP13.83□□□□□ -0.2
CLK1-211ENST00000481641 C15orf61A6NNL5 157 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 Q56UQ5 140 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 CADM3Q8N126 398 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 ZNF414Q96IQ9 312 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 SEC22AQ96IW7 307 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 CMTM3Q96MX0 182 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 OVOL2Q9BRP0 275 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 C5orf66Q9H5L9 145 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 SCPEP1Q9HB40 452 aa13.83□□□□□ -0.2
CLK1-211ENST00000481641 PLECQ15149 4684 aaKnown RBP13.83□□□□□ -0.2
CLK1-211ENST00000481641 NDUFA4O00483 81 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 RCVRNP35243 200 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 IZUMO4Q1ZYL8 232 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 LPCAT3Q6P1A2 487 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 OR2C3Q8N628 320 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 OR5B3Q8NH48 314 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 MRGPRFQ96AM1 343 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 DAZ1Q9NQZ3 744 aaKnown RBP13.82□□□□□ -0.2
CLK1-211ENST00000481641 FKBP11Q9NYL4 201 aa13.82□□□□□ -0.2
CLK1-211ENST00000481641 FAM25AB3EWG3 89 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 FAM25CB3EWG5 89 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 FAM25GB3EWG6 89 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 IGHV3-48P01763 117 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 S100GP29377 79 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 SPSB3Q6PJ21 355 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 H2BFWTQ7Z2G1 175 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 SLC38A6Q8IZM9 456 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 OR4A16Q8NH70 328 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 MISP3Q96FF7 219 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 TSC22D3Q99576 134 aa13.81□□□□□ -0.2
CLK1-211ENST00000481641 SPAG8Q99932 426 aaPredicted RBP13.81□□□□□ -0.2
CLK1-211ENST00000481641 HYDINQ4G0P3 5121 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 TSPAN4O14817 238 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 CTSGP08311 255 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 PI3P19957 117 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 RORCP51449 518 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 UCP3P55916 312 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 SPINK9Q5DT21 86 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 OR1P1Q8NH06 330 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 IL17DQ8TAD2 202 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 FAM212BQ9NTI7 297 aaPredicted RBP13.8□□□□□ -0.2
CLK1-211ENST00000481641 KLK11Q9UBX7 282 aa13.8□□□□□ -0.2
CLK1-211ENST00000481641 I3L2K1 104 aa13.79□□□□□ -0.2
CLK1-211ENST00000481641 ATP6V0BQ99437 205 aa13.79□□□□□ -0.2
CLK1-211ENST00000481641 IGHV3-49A0A0A0MS15 119 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 CTSDP07339 412 aaPredicted RBP13.78□□□□□ -0.2
CLK1-211ENST00000481641 PGAM2P15259 253 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 PRCDQ00LT1 54 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 CTF1Q16619 201 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 LAMTOR1Q6IAA8 161 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 OR52I2Q8NH67 350 aa13.78□□□□□ -0.2
CLK1-211ENST00000481641 EPPK1P58107 5090 aaKnown RBP13.78□□□□□ -0.2
CLK1-211ENST00000481641 K7EMT4 169 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 YIF1AO95070 293 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 MT-CO2P00403 227 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 CD3DP04234 171 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 SMIM18P0DKX4 95 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 HSPE1P61604 102 aaKnown RBP13.77□□□□□ -0.21
CLK1-211ENST00000481641 MZT2AQ6P582 158 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.21
CLK1-211ENST00000481641 RNF2Q99496 336 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 EXTL2Q9UBQ6 330 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 SMPXQ9UHP9 88 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 ALMS1Q8TCU4 4167 aa13.77□□□□□ -0.21
CLK1-211ENST00000481641 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 NUPL2O15504 423 aaKnown RBP13.76□□□□□ -0.21
CLK1-211ENST00000481641 IGKV1-5P01602 117 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 RPL35AP18077 110 aaKnown RBP13.76□□□□□ -0.21
CLK1-211ENST00000481641 MFAP4P55083 255 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 PIGPP57054 158 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 RNASE10Q5GAN6 216 aaKnown RBP13.76□□□□□ -0.21
CLK1-211ENST00000481641 LHFPL1Q86WI0 220 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 OR4D10Q8NGI6 311 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 TP53RKQ96S44 253 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
CLK1-211ENST00000481641 IGKV3-7A0A075B6H7 116 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 CHEK1O14757 476 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 JTBO76095 146 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 GABARAPO95166 117 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 ZNF182P17025 639 aaPredicted RBP13.75□□□□□ -0.21
CLK1-211ENST00000481641 TFPI2P48307 235 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 PPP5CP53041 499 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 RND3P61587 244 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 EWSR1Q01844 656 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLK1-211ENST00000481641 ZNF124Q15973 351 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 DEFB135Q30KP9 77 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 GPR107Q5VW38 600 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 APRG1Q8IVJ8 170 aa13.75□□□□□ -0.21
CLK1-211ENST00000481641 ZNF114Q8NC26 417 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms