RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 RNF126Q9BV68 326 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 SLA2Q9H6Q3 261 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 RANGRFQ9HD47 186 aaPredicted RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 ESM1Q9NQ30 184 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 PSENENQ9NZ42 101 aa6.51□□□□□ -1.37
SYNE1-225ENST00000481502 STRAPQ9Y3F4 350 aaKnown RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 F11RQ9Y624 299 aaKnown RBP6.51□□□□□ -1.37
SYNE1-225ENST00000481502 CELSR1Q9NYQ6 3014 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 E7EUB6 86 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 TAAR5O14804 337 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 ATP6V0E1O15342 81 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 FBXO24O75426 580 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 SCGB1D2O95969 90 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 IGHG4P01861 327 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 ELANEP08246 267 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 C4BPBP20851 252 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 NPY1RP25929 384 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 S100A11P31949 105 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 GPX4P36969 197 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-225ENST00000481502 PAX9P55771 341 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 S100A10P60903 97 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 GNB1P62873 340 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 HBG1P69891 147 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 HBG2P69892 147 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 WT1-ASQ06250 92 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 OR2F1Q13607 317 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 UNQ5815/PRO19632Q6UWF5 114 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 ACOT7LQ6ZUV0 252 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 Q71RC1 249 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-225ENST00000481502 ZNF546Q86UE3 836 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 STX12Q86Y82 276 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 RNF152Q8N8N0 203 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 LFNGQ8NES3 379 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 OR4F5Q8NH21 305 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 PINX1Q96BK5 328 aaKnown RBP6.5□□□□□ -1.37
SYNE1-225ENST00000481502 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
SYNE1-225ENST00000481502 AQP10Q96PS8 301 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 HSPB9Q9BQS6 159 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 WNT10AQ9GZT5 417 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 ZNF702PQ9H963 129 aa6.5□□□□□ -1.37
SYNE1-225ENST00000481502 GAR1Q9NY12 217 aaKnown RBP6.5□□□□□ -1.37
SYNE1-225ENST00000481502 LSM5Q9Y4Y9 91 aaKnown RBP6.5□□□□□ -1.37
SYNE1-225ENST00000481502 PLXNB1O43157 2135 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 TRAV14DV4A0A0A6YYC5 116 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 TRBV9A0A0B4J1U6 114 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 A0A0D9SG52 128 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 A0A0G2JLM5 398 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 A0A1B0GW64 132 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 RPS10-NUDT3A0A1W2PQS6 291 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 G3V3Q6 166 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 H0YIZ8 118 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 SSSCA1O60232 199 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 SOX15O60248 233 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 IFNA10P01566 189 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 IGLV1-40P01703 118 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 HKR1P10072 659 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 RNASE2P10153 161 aaKnown RBP6.49□□□□□ -1.37
SYNE1-225ENST00000481502 RPL12P30050 165 aaKnown RBP6.49□□□□□ -1.37
SYNE1-225ENST00000481502 FCGR2BP31994 310 aaPredicted RBP6.49□□□□□ -1.37
SYNE1-225ENST00000481502 SULT1A1P50225 295 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 NDPQ00604 133 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 CFHR3Q02985 330 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 ASPHD1Q5U4P2 390 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 TEX38Q6PEX7 206 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 Q6ZSV7 163 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 TMEM252Q8N6L7 170 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 NECAP1Q8NC96 275 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 OR10P1Q8NGE3 313 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 GRPEL2Q8TAA5 225 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 VN1R17PQ8TDU5 208 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 ABHD5Q8WTS1 349 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 USMG5Q96IX5 58 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 P2RX4Q99571 388 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 TXN2Q99757 166 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 HINT2Q9BX68 163 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 PARP11Q9NR21 331 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 MBD2Q9UBB5 411 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 TNFSF18Q9UNG2 199 aa6.49□□□□□ -1.37
SYNE1-225ENST00000481502 IGLV11-55A0A075B6I3 123 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 FAM223BA6NKX1 122 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 DFFBO76075 338 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 TMEM50AO95807 157 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 OR8U8P0C7N1 319 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 DEFA4P12838 97 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 CAV2P51636 162 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 AP2S1P53680 142 aaPredicted RBP6.48□□□□□ -1.37
SYNE1-225ENST00000481502 FOXL1Q12952 345 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 FOXE3Q13461 319 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 ZFP69Q49AA0 526 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 LRRC37A5PQ49AS3 106 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 C9orf152Q5JTZ5 239 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 SPANXN5Q5MJ07 72 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 C10orf55Q5SWW7 151 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 ETV3LQ6ZN32 361 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 FAM223AQ8IWN6 122 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 OR10W1Q8NGF6 305 aa6.48□□□□□ -1.37
SYNE1-225ENST00000481502 DCUN1D4Q92564 292 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms