RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CNIH2Q6PI25 160 aa9.66□□□□□ -0.86
NDC1-202ENST00000480952 ZNF767PQ75MW2 155 aa9.66□□□□□ -0.86
NDC1-202ENST00000480952 TCF24Q7RTU0 167 aa9.66□□□□□ -0.86
NDC1-202ENST00000480952 DMBX1Q8NFW5 382 aa9.66□□□□□ -0.86
NDC1-202ENST00000480952 GIMAP1Q8WWP7 306 aa9.66□□□□□ -0.86
NDC1-202ENST00000480952 LSM2Q9Y333 95 aaKnown RBP9.66□□□□□ -0.86
NDC1-202ENST00000480952 RRP15Q9Y3B9 282 aaKnown RBP9.66□□□□□ -0.86
NDC1-202ENST00000480952 SULT1C2O00338 296 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 HPRT1P00492 218 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 CD5P06127 495 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 EIF4EP06730 217 aaKnown RBP9.65□□□□□ -0.86
NDC1-202ENST00000480952 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.86
NDC1-202ENST00000480952 HSMCR30P0CW71 290 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 RAB6AP20340 208 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.86
NDC1-202ENST00000480952 TRAM1Q15629 374 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 UBE2DNLQ8IWF7 75 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 OR10C1Q96KK4 312 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 HINT2Q9BX68 163 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 ATG5Q9H1Y0 275 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 DCSTAMPQ9H295 470 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
NDC1-202ENST00000480952 F11RQ9Y624 299 aaKnown RBP9.65□□□□□ -0.86
NDC1-202ENST00000480952 TEX50A0A1B0GTY4 177 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
NDC1-202ENST00000480952 C16orf90A8MZG2 172 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 K7EIM0 57 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 RBFOX2O43251 390 aaKnown RBP eCLIP9.64□□□□□ -0.87
NDC1-202ENST00000480952 CDK2AP2O75956 126 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 PSMA1P25786 263 aaKnown RBP9.64□□□□□ -0.87
NDC1-202ENST00000480952 NPY1RP25929 384 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 POU2AF1Q16633 256 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 MORN3Q6PF18 240 aaPredicted RBP9.64□□□□□ -0.87
NDC1-202ENST00000480952 OR1L8Q8NGR8 309 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 SECTM1Q8WVN6 248 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 DGCR14Q96DF8 476 aaKnown RBP9.64□□□□□ -0.87
NDC1-202ENST00000480952 CCL28Q9NRJ3 127 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 SCN3BQ9NY72 215 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 TBC1D24Q9ULP9 559 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 CELA1Q9UNI1 258 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 X6R8D5 127 aa9.64□□□□□ -0.87
NDC1-202ENST00000480952 ST8SIA3O43173 380 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 FGF2P09038 288 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 SPP1P10451 314 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 CATR1Q13166 79 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 HACD4Q5VWC8 232 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 Q6ZR54 194 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 ZBTB34Q8NCN2 500 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 DUSP18Q8NEJ0 188 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 LSM10Q969L4 123 aaKnown RBP9.63□□□□□ -0.87
NDC1-202ENST00000480952 SCRT1Q9BWW7 348 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 CLEC5AQ9NY25 188 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 ANXA10Q9UJ72 324 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 LRP1BQ9NZR2 4599 aa9.63□□□□□ -0.87
NDC1-202ENST00000480952 IFITM5A6NNB3 132 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 PDCD5O14737 125 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 OR10A3P58181 314 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 FABP5Q01469 135 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 MSMO1Q15800 293 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 ZNF773Q6PK81 442 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 Q6ZRM9 215 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
NDC1-202ENST00000480952 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 FAM24BQ8N5W8 94 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 NUDCD2Q8WVJ2 157 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 ST8SIA2Q92186 375 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 SLC25A46Q96AG3 418 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 ZNF414Q96IQ9 312 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 CNBD2Q96M20 576 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 GINS3Q9BRX5 216 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 TMEM14BQ9NUH8 114 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 RABAC1Q9UI14 185 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 TPRKBQ9Y3C4 175 aa9.62□□□□□ -0.87
NDC1-202ENST00000480952 TRAV2A0A0B4J234 112 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 C4BPBP20851 252 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 FCGR2CP31995 323 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 MFAP4P55083 255 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 ERVK-16P61578 105 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 OR13F1Q8NGS4 319 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 CCDC90BQ9GZT6 254 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 SLC5A7Q9GZV3 580 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 NXF2Q9GZY0 626 aaKnown RBP9.61□□□□□ -0.87
NDC1-202ENST00000480952 PLEKHA2Q9HB19 425 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 ACOT13Q9NPJ3 140 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 RAB26Q9ULW5 256 aa9.61□□□□□ -0.87
NDC1-202ENST00000480952 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
NDC1-202ENST00000480952 CD74P04233 296 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 GNG2P59768 71 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 ARPC4P59998 168 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 UBE2UQ5VVX9 321 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 OR51H1Q8NH63 302 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 MISP3Q96FF7 219 aa9.6□□□□□ -0.87
NDC1-202ENST00000480952 TMEM56Q96MV1 263 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms