RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 MFAP2P55001 183 aa12.87□□□□□ -0.35
HSPG2-209ENST00000480900 SURF2Q15527 256 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-209ENST00000480900 OR1P1Q8NH06 330 aa12.87□□□□□ -0.35
HSPG2-209ENST00000480900 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
HSPG2-209ENST00000480900 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
HSPG2-209ENST00000480900 ZNF320A2RRD8 509 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 TMEM213A2RRL7 107 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 DISC1C4P0D8 188 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 ATG12O94817 140 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 AKAIN1P0CW23 69 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 HSPE1P61604 102 aaKnown RBP12.86□□□□□ -0.35
HSPG2-209ENST00000480900 PRCDQ00LT1 54 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 DEFB114Q30KQ6 69 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 FAAP20Q6NZ36 180 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 PLET1Q6UQ28 207 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 OR2C3Q8N628 320 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 OR4C16Q8NGL9 310 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 NXF2Q9GZY0 626 aaKnown RBP12.86□□□□□ -0.35
HSPG2-209ENST00000480900 ZC4H2Q9NQZ6 224 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 RSL24D1Q9UHA3 163 aaKnown RBP12.86□□□□□ -0.35
HSPG2-209ENST00000480900 CEPT1Q9Y6K0 416 aa12.86□□□□□ -0.35
HSPG2-209ENST00000480900 TGOLN2O43493 480 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 P0C879 139 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 EDN2P20800 178 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 CBLN1P23435 193 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 UCP1P25874 307 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 TNFSF8P32971 234 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 AKR1C2P52895 323 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 SPSB3Q6PJ21 355 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 ZNF114Q8NC26 417 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 BSCL2Q96G97 398 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-209ENST00000480900 PRRT1Q99946 306 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 ZNF436Q9C0F3 470 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-209ENST00000480900 PALMDQ9NP74 551 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 C21orf62Q9NYP8 219 aa12.85□□□□□ -0.35
HSPG2-209ENST00000480900 C14orf166Q9Y224 244 aaKnown RBP12.85□□□□□ -0.35
HSPG2-209ENST00000480900 OR2T8A6NH00 312 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 K7EIM0 57 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 ELLP55199 621 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-209ENST00000480900 IZUMO4Q1ZYL8 232 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 SCARB1Q8WTV0 552 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 CACNG8Q8WXS5 425 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 MARC2Q969Z3 335 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 SOSTQ9BQB4 213 aa12.84□□□□□ -0.35
HSPG2-209ENST00000480900 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 ZNF785A8K8V0 405 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 SP6Q3SY56 376 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 TMEM190Q8WZ59 177 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 RTBDNQ9BSG5 229 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-209ENST00000480900 TMEM222Q9H0R3 208 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 PLEKHA3Q9HB20 300 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 SLC2A8Q9NY64 477 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 UFC1Q9Y3C8 167 aa12.83□□□□□ -0.36
HSPG2-209ENST00000480900 NBEAL2Q6ZNJ1 2754 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 IGHV3-21A0A0B4J1V1 117 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 A0A0B4J293 547 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-209ENST00000480900 C8orf88P0DMB2 117 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 CD81P60033 236 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
HSPG2-209ENST00000480900 TM4SF20Q53R12 229 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 ZNF57Q68EA5 555 aaPredicted RBP12.82□□□□□ -0.36
HSPG2-209ENST00000480900 OR51S1Q8NGJ8 323 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 TM2D3Q9BRN9 247 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 C5orf66Q9H5L9 145 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 GAR1Q9NY12 217 aaKnown RBP12.82□□□□□ -0.36
HSPG2-209ENST00000480900 MLXQ9UH92 298 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 GPR132Q9UNW8 380 aa12.82□□□□□ -0.36
HSPG2-209ENST00000480900 TEX13DA0A0J9YY54 714 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-209ENST00000480900 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 INS-IGF2F8WCM5 200 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 I3L2K1 104 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 NDUFA4O00483 81 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 ST8SIA3O43173 380 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 CDS2O95674 445 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 OR5AC1P0C628 307 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 GUCA2BQ16661 112 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 Q56UQ5 140 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 FAM219AQ8IW50 185 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 SLC35G3Q8N808 338 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
HSPG2-209ENST00000480900 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
HSPG2-209ENST00000480900 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 WDR89Q96FK6 387 aaPredicted RBP12.81□□□□□ -0.36
HSPG2-209ENST00000480900 NEURL2Q9BR09 285 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 NAA60Q9H7X0 242 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 TUBA4BQ9H853 241 aa12.81□□□□□ -0.36
HSPG2-209ENST00000480900 MRPL27Q9P0M9 148 aaKnown RBP12.81□□□□□ -0.36
HSPG2-209ENST00000480900 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms