RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 OR1L8Q8NGR8 309 aa9.82□□□□□ -0.84
ABCF1-206ENST00000479542 PHLDA1Q8WV24 401 aaPredicted RBP9.82□□□□□ -0.84
ABCF1-206ENST00000479542 MFFQ9GZY8 342 aa9.82□□□□□ -0.84
ABCF1-206ENST00000479542 NDUFA4L2Q9NRX3 87 aa9.82□□□□□ -0.84
ABCF1-206ENST00000479542 EHFQ9NZC4 300 aa9.82□□□□□ -0.84
ABCF1-206ENST00000479542 SMIM31A0A1B0GVY4 71 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 SULT1C2O00338 296 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 TRAPPC2P0DI81 140 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 TRAPPC2BP0DI82 140 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 FCGR2BP31994 310 aaPredicted RBP9.81□□□□□ -0.84
ABCF1-206ENST00000479542 HERV-K104P61576 105 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 ZNF818PQ6ZRF7 136 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 TMEM17Q86X19 198 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 GPX8Q8TED1 209 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 CSTL1Q9H114 145 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 C11orf68Q9H3H3 251 aaKnown RBP9.81□□□□□ -0.84
ABCF1-206ENST00000479542 TMEM140Q9NV12 185 aa9.81□□□□□ -0.84
ABCF1-206ENST00000479542 F11RQ9Y624 299 aaKnown RBP9.81□□□□□ -0.84
ABCF1-206ENST00000479542 TRAV3A0A0B4J244 114 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
ABCF1-206ENST00000479542 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 ZNF182P17025 639 aaPredicted RBP9.8□□□□□ -0.84
ABCF1-206ENST00000479542 GNRHRP30968 328 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 TAS2R46P59540 309 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 WT1-ASQ06250 92 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 MZT2AQ6P582 158 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 GPR141Q7Z602 305 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 SNX29P2Q8IUI4 249 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 OR5H2Q8NGV7 314 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 MOB3AQ96BX8 217 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 OR10C1Q96KK4 312 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 TXN2Q99757 166 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 ZNF2Q9BSG1 426 aaPredicted RBP9.8□□□□□ -0.84
ABCF1-206ENST00000479542 SCPEP1Q9HB40 452 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 FAM212BQ9NTI7 297 aaPredicted RBP9.8□□□□□ -0.84
ABCF1-206ENST00000479542 FKBP11Q9NYL4 201 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 C21orf62Q9NYP8 219 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 SMPXQ9UHP9 88 aa9.8□□□□□ -0.84
ABCF1-206ENST00000479542 F2RP25116 425 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 HLA-DMAP28067 261 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 HRH1P35367 487 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 RELQ04864 619 aaPredicted RBP9.79□□□□□ -0.84
ABCF1-206ENST00000479542 SLC25A24Q6NUK1 477 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 RPP25LQ8N5L8 163 aaKnown RBP9.79□□□□□ -0.84
ABCF1-206ENST00000479542 DMBX1Q8NFW5 382 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 OR10W1Q8NGF6 305 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 OR5B3Q8NH48 314 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 SCARB1Q8WTV0 552 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 AP3S1Q92572 193 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 LSM10Q969L4 123 aaKnown RBP9.79□□□□□ -0.84
ABCF1-206ENST00000479542 UBQLN2Q9UHD9 624 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 SELENOKQ9Y6D0 94 aa9.79□□□□□ -0.84
ABCF1-206ENST00000479542 IGHV3-35A0A0C4DH35 117 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 OR2T8A6NH00 312 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 MARCH11A6NNE9 402 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 MPTX1A8MV57 137 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 FAM25AB3EWG3 89 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 FAM25CB3EWG5 89 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 FAM25GB3EWG6 89 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 K7EIM0 57 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 CTSDP07339 412 aaPredicted RBP9.78□□□□□ -0.84
ABCF1-206ENST00000479542 CTSGP08311 255 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 OR6F1Q8NGZ6 308 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 OR1P1Q8NH06 330 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 OR51H1Q8NH63 302 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 DGCR14Q96DF8 476 aaKnown RBP9.78□□□□□ -0.84
ABCF1-206ENST00000479542 TMEM56Q96MV1 263 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 FXYD6Q9H0Q3 95 aa9.78□□□□□ -0.84
ABCF1-206ENST00000479542 CHEK1O14757 476 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 PGLYRP1O75594 196 aaPredicted RBP9.77□□□□□ -0.85
ABCF1-206ENST00000479542 S1PR2O95136 353 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 RCVRNP35243 200 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 MFAP2P55001 183 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 ERVK-16P61578 105 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 SPCS2Q15005 226 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 AADACL3Q5VUY0 350 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 TSC22D3Q99576 134 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 RARRES2Q99969 163 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 EXTL2Q9UBQ6 330 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 PRNDQ9UKY0 176 aa9.77□□□□□ -0.85
ABCF1-206ENST00000479542 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 NUPL2O15504 423 aaKnown RBP9.76□□□□□ -0.85
ABCF1-206ENST00000479542 SNAPC5O75971 98 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 DFFBO76075 338 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 RLN1P04808 185 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 IFNA4P05014 189 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 RPA2P15927 270 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
ABCF1-206ENST00000479542 TSPAN5P62079 268 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 RNASE12Q5GAN4 147 aaKnown RBP9.76□□□□□ -0.85
ABCF1-206ENST00000479542 CLVS1Q8IUQ0 354 aaPredicted RBP9.76□□□□□ -0.85
ABCF1-206ENST00000479542 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 C11orf45Q8TAV5 145 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 RNF2Q99496 336 aa9.76□□□□□ -0.85
ABCF1-206ENST00000479542 C20orf24Q9BUV8 137 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms