RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 NUP35Q8NFH5 326 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 SLC25A40Q8TBP6 338 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 PEF1Q9UBV8 284 aaKnown RBP8.11□□□□□ -1.11
COL13A1-207ENST00000478219 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 LSM4Q9Y4Z0 139 aaKnown RBP8.11□□□□□ -1.11
COL13A1-207ENST00000478219 TNCP24821 2201 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 TNRC6BQ9UPQ9 1833 aaKnown RBP8.11□□□□□ -1.11
COL13A1-207ENST00000478219 ADAMTS20P59510 1910 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 IGHV3-43A0A0B4J1X8 118 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 A0A0G2JMM0 328 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 A0A1W2PPB8 328 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 KIR3DP1A8MWS1 328 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 DEFB108AA8MXU0 73 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 CRXO43186 299 aaPredicted RBP8.11□□□□□ -1.11
COL13A1-207ENST00000478219 SMPD2O60906 423 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 IGLV3-19P01714 112 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 P04436 131 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 IGHV3-43DP0DP04 118 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 RBPJQ06330 500 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 KLF5Q13887 457 aaPredicted RBP8.11□□□□□ -1.11
COL13A1-207ENST00000478219 RAB30Q15771 203 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 TIGITQ495A1 244 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 Q6ZS52 159 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 UBALD2Q8IYN6 164 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 Q8TCH9 128 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 IGF2BP2-AS1Q96M15 143 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 GCM1Q9NP62 436 aa8.11□□□□□ -1.11
COL13A1-207ENST00000478219 MBNL3Q9NUK0 354 aaKnown RBP8.11□□□□□ -1.11
COL13A1-207ENST00000478219 DYSFO75923 2080 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 C21orf140B9A014 251 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 C12orf77C9JDV5 145 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 AREGP15514 252 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 FKBP2P26885 142 aaKnown RBP8.1□□□□□ -1.11
COL13A1-207ENST00000478219 CCL7P80098 99 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 WDR86Q86TI4 376 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 J3QR06 171 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 PSPNO60542 156 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 GFRA3O60609 400 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 AGFG2O95081 481 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 IGFBP2P18065 325 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 ZNF138P52744 262 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 OR4A5Q8NH83 315 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 FAM234AQ9H0X4 552 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 SAP30LQ9HAJ7 183 aa8.1□□□□□ -1.11
COL13A1-207ENST00000478219 HEYLQ9NQ87 328 aaPredicted RBP8.1□□□□□ -1.11
COL13A1-207ENST00000478219 PRRC2CQ9Y520 2896 aaKnown RBP8.09□□□□□ -1.11
COL13A1-207ENST00000478219 MPDU1O75352 247 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 GPR183P32249 361 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 VDAC2P45880 294 aaPredicted RBP8.09□□□□□ -1.11
COL13A1-207ENST00000478219 RAC3P60763 192 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 PCBD1P61457 104 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 COX19Q49B96 90 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 MOB3BQ86TA1 216 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 LINC00596Q86U02 117 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 GGNQ86UU5 652 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 TPRX1Q8N7U7 411 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 MBD6Q96DN6 1003 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 URB1O60287 2271 aaKnown RBP8.09□□□□□ -1.11
COL13A1-207ENST00000478219 ZFHX4Q86UP3 3567 aa8.09□□□□□ -1.11
COL13A1-207ENST00000478219 ZNF207O43670 478 aaKnown RBP8.09□□□□□ -1.12
COL13A1-207ENST00000478219 PROP1O75360 226 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 PF4V1P10720 104 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 DSCR4P56555 118 aaPredicted RBP8.09□□□□□ -1.12
COL13A1-207ENST00000478219 TCTAP57738 103 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 B3GALT5-AS1P59052 145 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 NHLH1Q02575 133 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 SAMD13Q5VXD3 122 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 VWA1Q6PCB0 445 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 PRSS57Q6UWY2 283 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 PLXDC1Q8IUK5 500 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 SPEM1Q8N4L4 309 aa8.09□□□□□ -1.12
COL13A1-207ENST00000478219 SF3B5Q9BWJ5 86 aaKnown RBP8.09□□□□□ -1.12
COL13A1-207ENST00000478219 H3BUT2 72 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 AESQ08117 197 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 WIPI1Q5MNZ9 446 aaPredicted RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 WIPF2Q8TF74 440 aaPredicted RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 SNRNP40Q96DI7 357 aaKnown RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 HSD17B10Q99714 261 aaKnown RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 TIMM8BQ9Y5J9 83 aaPredicted RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 HILPDAQ9Y5L2 63 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 HBZP02008 142 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 RFPL3SP0C7P2 107 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 MYOD1P15172 320 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 APOBEC3AP31941 199 aaPredicted RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 ARF6P62330 175 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 HIST1H1AQ02539 215 aaPredicted RBP8.08□□□□□ -1.12
COL13A1-207ENST00000478219 CATR1Q13166 79 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 TRAT1Q6PIZ9 186 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 MOB1BQ7L9L4 216 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 TCF24Q7RTU0 167 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 TEX45Q8NA69 505 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 GTSF1LQ9H1H1 148 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 PILRBQ9UKJ0 227 aa8.08□□□□□ -1.12
COL13A1-207ENST00000478219 PPIAL4EA0A075B759 164 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms