RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 CD2P06729 351 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 SAA1P0DJI8 122 aaPredicted RBP4.25□□□□□ -1.73
LINC00173-202ENST00000477702 ZBTB25P24278 435 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 BDKRB2P30411 391 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 MAS1LP35410 378 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 MRPL28Q13084 256 aaKnown RBP4.25□□□□□ -1.73
LINC00173-202ENST00000477702 GPR176Q14439 515 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 MEDAGQ5VYS4 303 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 C12orf73Q69YU5 71 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 TRPT1Q86TN4 253 aaKnown RBP4.25□□□□□ -1.73
LINC00173-202ENST00000477702 MMD2Q8IY49 270 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 C10orf67Q8IYJ2 551 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 VKORC1L1Q8N0U8 176 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 JAGN1Q8N5M9 183 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 ZNF114Q8NC26 417 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 PTX4Q96A99 478 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 RRNAD1Q96FB5 475 aaKnown RBP4.25□□□□□ -1.73
LINC00173-202ENST00000477702 CXorf58Q96LI9 332 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 POMPQ9Y244 141 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 AP4S1Q9Y587 144 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
LINC00173-202ENST00000477702 IGLV11-55A0A075B6I3 123 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 IGHV3-21A0A0B4J1V1 117 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 IGHV7-4-1A0A0J9YVY3 117 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 TCRBV3S1A0A5B6 114 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 TMEM212A6NML5 194 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 PRSS47A8MTI9 375 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 DNASE2O00115 360 aaPredicted RBP4.24□□□□□ -1.73
LINC00173-202ENST00000477702 CHEK1O14757 476 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 CIB2O75838 187 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 ATP5HO75947 161 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 DHFRP00374 187 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 CRYGCP07315 174 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 HIST1H1BP16401 226 aaKnown RBP4.24□□□□□ -1.73
LINC00173-202ENST00000477702 RPL27AP46776 148 aaKnown RBP4.24□□□□□ -1.73
LINC00173-202ENST00000477702 PSMD7P51665 324 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 GBX2P52951 348 aaPredicted RBP4.24□□□□□ -1.73
LINC00173-202ENST00000477702 CDK10Q15131 360 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 ATP6AP1Q15904 470 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 TMEM41BQ5BJD5 291 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 ACTL10Q5JWF8 245 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 C1orf146Q5VVC0 180 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 GGNBP1Q5YKI7 109 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 KDM4DQ6B0I6 523 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 TCF24Q7RTU0 167 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 C6orf201Q7Z4U5 140 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 LHFPL3Q86UP9 236 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 ACBD7Q8N6N7 88 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 OR6M1Q8NGM8 313 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 NUDCD2Q8WVJ2 157 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 Q96MT0 163 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 CMTM3Q96MX0 182 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 NEDD4LQ96PU5 975 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 HDHD3Q9BSH5 251 aaPredicted RBP4.24□□□□□ -1.73
LINC00173-202ENST00000477702 DCUN1D5Q9BTE7 237 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 OR2D2Q9H210 308 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 SDHAF2Q9NX18 166 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 RDH8Q9NYR8 311 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 LINC00588Q9Y4M8 146 aa4.24□□□□□ -1.73
LINC00173-202ENST00000477702 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 TRAV8-7A0A075B6U6 113 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 IGHV3-66A0A0C4DH42 116 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 IGKV1-6A0A0C4DH72 117 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 J3QRE1 110 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 K7EMT4 169 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 NDUFA4O00483 81 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 CREBL2O60519 120 aaPredicted RBP4.23□□□□□ -1.73
LINC00173-202ENST00000477702 YIF1AO95070 293 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 NAPSAO96009 420 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 IFNA5P01569 189 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 CD3GP09693 182 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 RRASP10301 218 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 SPP1P10451 314 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 GTF2A1P52655 376 aaPredicted RBP4.23□□□□□ -1.73
LINC00173-202ENST00000477702 PAFAH1B2P68402 229 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 HLA-DRB3P79483 266 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 OR2B11Q5JQS5 317 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 OR2G6Q5TZ20 316 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 FAM222AQ5U5X8 452 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 ZNF880Q6PDB4 577 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.23□□□□□ -1.73
LINC00173-202ENST00000477702 CENPNQ96H22 339 aaPredicted RBP4.23□□□□□ -1.73
LINC00173-202ENST00000477702 CIB1Q99828 191 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 NIPSNAP3BQ9BS92 247 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 MS4A6AQ9H2W1 248 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 SMPD3Q9NY59 655 aaPredicted RBP4.23□□□□□ -1.73
LINC00173-202ENST00000477702 XCL2Q9UBD3 114 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 CKLFQ9UBR5 152 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 RABAC1Q9UI14 185 aa4.23□□□□□ -1.73
LINC00173-202ENST00000477702 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
LINC00173-202ENST00000477702 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
LINC00173-202ENST00000477702 C15orf62A8K5M9 175 aa4.22□□□□□ -1.73
LINC00173-202ENST00000477702 PTGES3LE9PB15 166 aa4.22□□□□□ -1.73
LINC00173-202ENST00000477702 NUPL2O15504 423 aaKnown RBP4.22□□□□□ -1.73
LINC00173-202ENST00000477702 DFFBO76075 338 aa4.22□□□□□ -1.73
LINC00173-202ENST00000477702 ZNF735P0CB33 412 aa4.22□□□□□ -1.73
LINC00173-202ENST00000477702 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.73
LINC00173-202ENST00000477702 POLR2IP36954 125 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms