RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 OR2D2Q9H210 308 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 MAP6D1Q9H9H5 199 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 CHMP1AQ9HD42 196 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 PLEKHJ1Q9NW61 149 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 TECRQ9NZ01 308 aaKnown RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 CKLFQ9UBR5 152 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 GHRLQ9UBU3 117 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 UBQLN2Q9UHD9 624 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ZNF221Q9UK13 617 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 ELF5Q9UKW6 265 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-207ENST00000477676 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.87
CKS1B-207ENST00000477676 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.88
CKS1B-207ENST00000477676 IGKV1D-13A0A0B4J2D9 117 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 A0A1B0GUV1 79 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 TRDCB7Z8K6 153 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 BET1O15155 118 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 FABP7O15540 132 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 GGCTO75223 188 aaKnown RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 GNAO1P09471 354 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 UBBP0CG47 229 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 IGKV1-13P0DP09 117 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 CTRB1P17538 263 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 RPL35AP18077 110 aaKnown RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 SRMP19623 302 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 BMI1P35226 326 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 CLDN12P56749 244 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 MRPS15P82914 257 aaKnown RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 CBX3Q13185 183 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF674Q2M3X9 581 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 CTRB2Q6GPI1 263 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 TMEM91Q6ZNR0 172 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 RBPMS2Q6ZRY4 209 aaKnown RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 SLC16A13Q7RTY0 426 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 ACOT12Q8WYK0 555 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 PHB2Q99623 299 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 SRSF8Q9BRL6 282 aaKnown RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 C1QTNF4Q9BXJ3 329 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 RIMS4Q9H426 269 aaPredicted RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 FKBP14Q9NWM8 211 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 PSORS1C1Q9UIG5 152 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 APLNQ9ULZ1 77 aa3.33□□□□□ -1.88
CKS1B-207ENST00000477676 LSM2Q9Y333 95 aaKnown RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 KLK5Q9Y337 293 aaPredicted RBP3.33□□□□□ -1.88
CKS1B-207ENST00000477676 IGLV11-55A0A075B6I3 123 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 IGHV3OR16-8A0A075B7F1 116 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 TRAV3A0A0B4J244 114 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 TRAV34A0A0B4J273 112 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 TRAV25A0A0B4J276 109 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF320A2RRD8 509 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 EFCAB10A6NFE3 127 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 J3QRK9 145 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 SLC17A2O00624 439 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 RTL8CO15255 209 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 DEFB4AO15263 64 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 REG1AP05451 166 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 CRYGCP07315 174 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 FCGR3AP08637 254 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 UCHL1P09936 223 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF735P0CB33 412 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 MYL12AP19105 171 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 ANXA7P20073 488 aaKnown RBP3.32□□□□□ -1.88
CKS1B-207ENST00000477676 PSMD7P51665 324 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 MFAP2P55001 183 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 WNT4P56705 351 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 CDK10Q15131 360 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 RTL8BQ17RB0 113 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 VMA21Q3ZAQ7 101 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 OR2B11Q5JQS5 317 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 RBM48Q5RL73 367 aaKnown RBP3.32□□□□□ -1.88
CKS1B-207ENST00000477676 GGNBP1Q5YKI7 109 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 APRG1Q8IVJ8 170 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 MMD2Q8IY49 270 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 H1FOOQ8IZA3 346 aaPredicted RBP3.32□□□□□ -1.88
CKS1B-207ENST00000477676 PUSL1Q8N0Z8 303 aaKnown RBP3.32□□□□□ -1.88
CKS1B-207ENST00000477676 OR6M1Q8NGM8 313 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 OR4A4PQ8NGN8 299 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 OR1L6Q8NGR2 347 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF502Q8TBZ5 544 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 PHYHIPQ92561 330 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 URB1-AS1Q96HZ7 61 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 CMSS1Q9BQ75 279 aaKnown RBP3.32□□□□□ -1.88
CKS1B-207ENST00000477676 C9orf16Q9BUW7 83 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 S100A14Q9HCY8 104 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 C12orf4Q9NQ89 552 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 SLC2A9Q9NRM0 540 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF257Q9Y2Q1 563 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 PAM16Q9Y3D7 125 aa3.32□□□□□ -1.88
CKS1B-207ENST00000477676 AK6Q9Y3D8 172 aaKnown RBP3.32□□□□□ -1.88
CKS1B-207ENST00000477676 DMBT1Q9UGM3 2413 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 A0A087WYN8 130 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 KIR2DL5BA0A0G2JN68 375 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 KIR2DL5BA0A0G2JPC4 375 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 IGLC7A0M8Q6 106 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 MFNGO00587 321 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF207O43670 478 aaKnown RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 FCGR3BO75015 233 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms