RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 HSPE1P61604 102 aaKnown RBP16.42■□□□□ 0.22
COL9A3-211ENST00000477612 MEF2DQ14814 521 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 GTSCR1Q86UQ5 136 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 OR2C3Q8N628 320 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 OR1P1Q8NH06 330 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 DYNLRB2Q8TF09 96 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 ISOC1Q96CN7 298 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 SOSTQ9BQB4 213 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 TM2D3Q9BRN9 247 aa16.42■□□□□ 0.22
COL9A3-211ENST00000477612 NXF2Q9GZY0 626 aaKnown RBP16.42■□□□□ 0.22
COL9A3-211ENST00000477612 KMT2CQ8NEZ4 4911 aaKnown RBP16.41■□□□□ 0.22
COL9A3-211ENST00000477612 K7EIM0 57 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 B3GALNT1O75752 331 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 PPP5CP53041 499 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 PRCDQ00LT1 54 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 IL18Q14116 193 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 PLET1Q6UQ28 207 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 CCDC71LQ8N9Z2 235 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 ZNF114Q8NC26 417 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 OR13C8Q8NGS7 320 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 MARCH1Q8TCQ1 289 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 SCARB1Q8WTV0 552 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 BSCL2Q96G97 398 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-211ENST00000477612 COPZ2Q9P299 210 aa16.41■□□□□ 0.22
COL9A3-211ENST00000477612 ZNF320A2RRD8 509 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 F8W735 103 aaPredicted RBP16.4■□□□□ 0.22
COL9A3-211ENST00000477612 GSTZ1O43708 216 aaPredicted RBP16.4■□□□□ 0.22
COL9A3-211ENST00000477612 IGKV1-5P01602 117 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 UCP1P25874 307 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 SURF2Q15527 256 aaPredicted RBP16.4■□□□□ 0.22
COL9A3-211ENST00000477612 SCGB2B2Q4G0G5 96 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 SPSB3Q6PJ21 355 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 UNQ9165/PRO28630Q6UXU0 137 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 MARC2Q969Z3 335 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 RCHY1Q96PM5 261 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 PALMDQ9NP74 551 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 C21orf62Q9NYP8 219 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 DNAH7Q8WXX0 4024 aa16.4■□□□□ 0.22
COL9A3-211ENST00000477612 INS-IGF2F8WCM5 200 aa16.39■□□□□ 0.21
COL9A3-211ENST00000477612 NOL3O60936 208 aaKnown RBP16.39■□□□□ 0.21
COL9A3-211ENST00000477612 ATG12O94817 140 aa16.39■□□□□ 0.21
COL9A3-211ENST00000477612 AKAIN1P0CW23 69 aa16.39■□□□□ 0.21
COL9A3-211ENST00000477612 FCGR2BP31994 310 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-211ENST00000477612 CACNG8Q8WXS5 425 aa16.39■□□□□ 0.21
COL9A3-211ENST00000477612 RTBDNQ9BSG5 229 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-211ENST00000477612 C6orf62Q9GZU0 229 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-211ENST00000477612 ZMAT4Q9H898 229 aa16.39■□□□□ 0.21
COL9A3-211ENST00000477612 MRPL27Q9P0M9 148 aaKnown RBP16.39■□□□□ 0.21
COL9A3-211ENST00000477612 RSL24D1Q9UHA3 163 aaKnown RBP16.39■□□□□ 0.21
COL9A3-211ENST00000477612 CEPT1Q9Y6K0 416 aa16.39■□□□□ 0.21
COL9A3-211ENST00000477612 DISC1C4P0D8 188 aa16.38■□□□□ 0.21
COL9A3-211ENST00000477612 FAAP20Q6NZ36 180 aa16.38■□□□□ 0.21
COL9A3-211ENST00000477612 LINC00322Q6ZN03 302 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-211ENST00000477612 UXS1Q8NBZ7 420 aa16.38■□□□□ 0.21
COL9A3-211ENST00000477612 OR4C16Q8NGL9 310 aa16.38■□□□□ 0.21
COL9A3-211ENST00000477612 MLXQ9UH92 298 aa16.38■□□□□ 0.21
COL9A3-211ENST00000477612 GPR132Q9UNW8 380 aa16.38■□□□□ 0.21
COL9A3-211ENST00000477612 A0A0B4J293 547 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 ANKRD20A5PA0PJZ0 165 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 TNFSF8P32971 234 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 TM4SF20Q53R12 229 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 ZNF57Q68EA5 555 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-211ENST00000477612 TMEM190Q8WZ59 177 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 NEURL2Q9BR09 285 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 C5orf66Q9H5L9 145 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 SLC2A8Q9NY64 477 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 UFC1Q9Y3C8 167 aa16.37■□□□□ 0.21
COL9A3-211ENST00000477612 OR2T8A6NH00 312 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 I3L2K1 104 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 NDUFA4O00483 81 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 CDS2O95674 445 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 ADMP35318 185 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 CD81P60033 236 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 ERHP84090 104 aaKnown RBP16.36■□□□□ 0.21
COL9A3-211ENST00000477612 IZUMO4Q1ZYL8 232 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 SP6Q3SY56 376 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 GLYATL2Q8WU03 294 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 WDR89Q96FK6 387 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-211ENST00000477612 CHRDL1Q9BU40 450 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 TMEM222Q9H0R3 208 aa16.36■□□□□ 0.21
COL9A3-211ENST00000477612 GAR1Q9NY12 217 aaKnown RBP16.36■□□□□ 0.21
COL9A3-211ENST00000477612 TRAV25A0A0B4J276 109 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 CD7P09564 240 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 AKR1C2P52895 323 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 PVRIGQ6DKI7 326 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 TMEM61Q8N0U2 210 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 MCFD2Q8NI22 146 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 TXN2Q99757 166 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 PRRT1Q99946 306 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 PLEKHA3Q9HB20 300 aa16.35■□□□□ 0.21
COL9A3-211ENST00000477612 C14orf166Q9Y224 244 aaKnown RBP16.35■□□□□ 0.21
COL9A3-211ENST00000477612 IGHV3-21A0A0B4J1V1 117 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 IGHV3-35A0A0C4DH35 117 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 TEX13DA0A0J9YY54 714 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-211ENST00000477612 FABP12A6NFH5 140 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 K7EMT4 169 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 CTSGP08311 255 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 HAGHQ16775 308 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 TRIM16LQ309B1 348 aa16.34■□□□□ 0.21
COL9A3-211ENST00000477612 AARDQ4LEZ3 155 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms