RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 OR4S2Q8NH73 311 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 LHFPL5Q8TAF8 219 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 THAP6Q8TBB0 222 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 LSM10Q969L4 123 aaKnown RBP6.42□□□□□ -1.38
HDAC6-221ENST00000477561 RRNAD1Q96FB5 475 aaKnown RBP6.42□□□□□ -1.38
HDAC6-221ENST00000477561 SEC22AQ96IW7 307 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF355PQ9NSJ1 428 aa6.42□□□□□ -1.38
HDAC6-221ENST00000477561 A0A1B0GU03 582 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 MSGN1A6NI15 193 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 HMSDA8MTL9 139 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 SEC14L6B5MCN3 397 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 K7EIL1 84 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 TRGV3P03979 118 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 RLN2P04090 185 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 SLC25A4P12235 298 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 C4BPBP20851 252 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 PSMB6P28072 239 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 UBE2KP61086 200 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 ERVK-16P61578 105 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 DEFA5Q01523 94 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF616Q08AN1 781 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 FHL3Q13643 280 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 TNXAQ16473 311 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 MRGPRG-AS1Q2M3A8 158 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 VMA21Q3ZAQ7 101 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF585BQ52M93 769 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 DEFB121Q5J5C9 76 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 ASPHD1Q5U4P2 390 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 C11orf87Q6NUJ2 197 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 VKORC1L1Q8N0U8 176 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 ZBTB8BQ8NAP8 495 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-221ENST00000477561 PPP1R1CQ8WVI7 109 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 DPF1Q92782 380 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 OR10C1Q96KK4 312 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 AIFM2Q9BRQ8 373 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 MCRIP2Q9BUT9 160 aaKnown RBP6.41□□□□□ -1.38
HDAC6-221ENST00000477561 PLEKHA2Q9HB19 425 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 GSKIPQ9P0R6 139 aa6.41□□□□□ -1.38
HDAC6-221ENST00000477561 IGHV4OR15-8A0A075B7B6 117 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 A0A087WW49 117 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 FXYD6-FXYD2A0A087WZ82 144 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 MPC2O95563 127 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 SAA1P0DJI8 122 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-221ENST00000477561 NUP62P37198 522 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-221ENST00000477561 SLURP1P55000 103 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 BRWD1-AS2P59051 145 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 S100A10P60903 97 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 RUNX1Q01196 453 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 EGFEM1PQ0D2K5 195 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 PRSS8Q16651 343 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 LRRC37A5PQ49AS3 106 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 NMSQ5H8A3 153 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 C10orf55Q5SWW7 151 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 SSX9Q7RTT3 188 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 TEX45Q8NA69 505 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 OSR1Q8TAX0 266 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-221ENST00000477561 DCUN1D4Q92564 292 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 GPR61Q9BZJ8 451 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 ZNF430Q9H8G1 570 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-221ENST00000477561 COA4Q9NYJ1 87 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 CACFD1Q9UGQ2 172 aa6.4□□□□□ -1.38
HDAC6-221ENST00000477561 DNAH9Q9NYC9 4486 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 TRAV14DV4A0A0A6YYC5 116 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 MPTX1A8MV57 137 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 LINC01619G3V211 115 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 G3V3Q6 166 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 RAMP3O60896 148 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 S1PR2O95136 353 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 SCGB1D2O95969 90 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 HRASP01112 189 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 IGKV1-39P01597 117 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 PRH1P02810 166 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 IGKV1D-39P04432 117 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 LGALS1P09382 135 aaKnown RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 OR8U8P0C7N1 319 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 NQO2P16083 231 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 PVALBP20472 110 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 NKX2-5P52952 324 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 IL15RAQ13261 267 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 Q5BKY6 102 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 C9orf66Q5T8R8 295 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 PRSS54Q6PEW0 395 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 ZNF546Q86UE3 836 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 INO80EQ8NBZ0 244 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 DMBX1Q8NFW5 382 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 OR11H4Q8NGC9 324 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 OR4D5Q8NGN0 318 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 OR1S1Q8NH92 325 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 SRSF12Q8WXF0 261 aaKnown RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 DLX4Q92988 240 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 GPR146Q96CH1 333 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-221ENST00000477561 RHOVQ96L33 236 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 SLA2Q9H6Q3 261 aa6.39□□□□□ -1.39
HDAC6-221ENST00000477561 A0A0D9SG52 128 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 ANKRD34BA5PLL1 514 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 MARCH11A6NNE9 402 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms