RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 C11orf94C9JXX5 98 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 SULT1C2O00338 296 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 NUPL2O15504 423 aaKnown RBP7.01□□□□□ -1.29
COL4A5-204ENST00000477429 SERPINE2P07093 398 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 CD36P16671 472 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 C8orf59Q8N0T1 100 aaPredicted RBP7.01□□□□□ -1.29
COL4A5-204ENST00000477429 SPAG16Q8N0X2 631 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 TMEM116Q8NCL8 245 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 CSNK1G2-AS1Q8NCQ2 148 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 ST8SIA2Q92186 375 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 BSCL2Q96G97 398 aaPredicted RBP7.01□□□□□ -1.29
COL4A5-204ENST00000477429 OR10C1Q96KK4 312 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 RNF126Q9BV68 326 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 TMEM140Q9NV12 185 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 C21orf62Q9NYP8 219 aa7.01□□□□□ -1.29
COL4A5-204ENST00000477429 TMEM235A6NFC5 223 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 IFITM5A6NNB3 132 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 C15orf62A8K5M9 175 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 ZNF705EA8MWA4 302 aaPredicted RBP7□□□□□ -1.29
COL4A5-204ENST00000477429 HRASP01112 189 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 AMBPP02760 352 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 FCER2P06734 321 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 HSMCR30P0CW71 290 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 DTYMKP23919 212 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 TALDO1P37837 337 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 SSX1Q16384 188 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 LGALS9BQ3B8N2 356 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 LCE2CQ5TA81 110 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 PVRIGQ6DKI7 326 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 ZNF66Q6ZN08 573 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 TCF24Q7RTU0 167 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 TRPT1Q86TN4 253 aaKnown RBP7□□□□□ -1.29
COL4A5-204ENST00000477429 SECTM1Q8WVN6 248 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 UFD1Q92890 307 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 QTRT1Q9BXR0 403 aaKnown RBP7□□□□□ -1.29
COL4A5-204ENST00000477429 MS4A6AQ9H2W1 248 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 NDUFA4L2Q9NRX3 87 aa7□□□□□ -1.29
COL4A5-204ENST00000477429 F11RQ9Y624 299 aaKnown RBP7□□□□□ -1.29
COL4A5-204ENST00000477429 DEFB131BA0A096LNP1 70 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 DFFBO76075 338 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 GADD45AP24522 165 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 POU2AF1Q16633 256 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 Q56UQ5 140 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 HACD4Q5VWC8 232 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 CNIH2Q6PI25 160 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 SPSB3Q6PJ21 355 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 ARPC5LQ9BPX5 153 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 COMMD5Q9GZQ3 224 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 C6orf62Q9GZU0 229 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-204ENST00000477429 ATG5Q9H1Y0 275 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 ANXA10Q9UJ72 324 aa6.99□□□□□ -1.29
COL4A5-204ENST00000477429 I3L2K1 104 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 MRPS14O60783 128 aaKnown RBP6.98□□□□□ -1.29
COL4A5-204ENST00000477429 ARL6IP5O75915 188 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 CD74P04233 296 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 TRAPPC2P0DI81 140 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 TRAPPC2BP0DI82 140 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 FCGR2CP31995 323 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 ZNF818PQ6ZRF7 136 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 Q6ZRM9 215 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 OR13F1Q8NGS4 319 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 OR51H1Q8NH63 302 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 DGCR14Q96DF8 476 aaKnown RBP6.98□□□□□ -1.29
COL4A5-204ENST00000477429 SRSF8Q9BRL6 282 aaKnown RBP6.98□□□□□ -1.29
COL4A5-204ENST00000477429 HINT2Q9BX68 163 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 DCSTAMPQ9H295 470 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 VSIRQ9H7M9 311 aa6.98□□□□□ -1.29
COL4A5-204ENST00000477429 FLG2Q5D862 2391 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-204ENST00000477429 RBFOX2O43251 390 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL4A5-204ENST00000477429 SLC22A5O76082 557 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 YIF1AO95070 293 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 NQO2P16083 231 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 TAS2R31P59538 309 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 Q8N1X5 172 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 PACRGLQ8N7B6 248 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 SLC25A46Q96AG3 418 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 NXF2Q9GZY0 626 aaKnown RBP6.97□□□□□ -1.29
COL4A5-204ENST00000477429 THYN1Q9P016 225 aa6.97□□□□□ -1.29
COL4A5-204ENST00000477429 NACAE9PAV3 2078 aa6.96□□□□□ -1.29
COL4A5-204ENST00000477429 TRAV14DV4A0A0A6YYC5 116 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 A0A1B0GU03 582 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 HPRT1P00492 218 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 PPYP01298 95 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 CTXN2P0C2S0 81 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 P0DMU3 169 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 FAM231AP0DMU4 169 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 FAM231CP0DMU5 169 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 MIFP14174 115 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 MLLT11Q13015 90 aaPredicted RBP6.96□□□□□ -1.3
COL4A5-204ENST00000477429 MGLLQ99685 303 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 SLC5A7Q9GZV3 580 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 DUSP21Q9H596 190 aa6.96□□□□□ -1.3
COL4A5-204ENST00000477429 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
COL4A5-204ENST00000477429 MUC2Q02817 5179 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 TRAV1-2A0A0B4J238 106 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 K7EQG2 157 aa6.95□□□□□ -1.3
COL4A5-204ENST00000477429 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms