RNA–Protein interactions for RNA: ENST00000477375.5

IMP4-215, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, human

TSL 2

Gene IMP4, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IMP4-215	ENST00000477375	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	FAM223A	Q8IWN6	122 aa		13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	NECAP1	Q8NC96	275 aa		13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	GALNT14	Q96FL9	552 aa		13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	MCRIP2	Q9BUT9	160 aa	Known RBP	13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	NUDT15	Q9NV35	164 aa		13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	PEF1	Q9UBV8	284 aa	Known RBP	13.35	□□□□□ -0.27
IMP4-215	ENST00000477375	IGLV11-55	A0A075B6I3	123 aa		13.34	□□□□□ -0.27
IMP4-215	ENST00000477375	OR13C7	P0DN81	318 aa		13.34	□□□□□ -0.27
IMP4-215	ENST00000477375	MFAP2	P55001	183 aa		13.34	□□□□□ -0.27
IMP4-215	ENST00000477375	NRARP	Q7Z6K4	114 aa		13.34	□□□□□ -0.27
IMP4-215	ENST00000477375	TMEM222	Q9H0R3	208 aa		13.34	□□□□□ -0.27
IMP4-215	ENST00000477375	RANGRF	Q9HD47	186 aa	Predicted RBP	13.34	□□□□□ -0.27
IMP4-215	ENST00000477375	PRND	Q9UKY0	176 aa		13.34	□□□□□ -0.27
IMP4-215	ENST00000477375		A0A0B4J293	547 aa		13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	CDS2	O95674	445 aa		13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	H2AFB2	P0C5Z0	115 aa		13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	MECP2	P51608	486 aa	Known RBP	13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	SUPT4H1	P63272	117 aa	Known RBP	13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	C9orf66	Q5T8R8	295 aa		13.33	□□□□□ -0.28
IMP4-215	ENST00000477375		Q6ZRM9	215 aa		13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	SELENOH	Q8IZQ5	122 aa	Known RBP	13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	OR4A16	Q8NH70	328 aa		13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	SRSF8	Q9BRL6	282 aa	Known RBP	13.33	□□□□□ -0.28
IMP4-215	ENST00000477375	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	MFSD2B	A6NFX1	497 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	PPP5D1	E7EU14	171 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	BMPR1B	O00238	502 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	DEFA4	P12838	97 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	AKR1C2	P52895	323 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	KLF5	Q13887	457 aa	Predicted RBP	13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	TMEM187	Q14656	261 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	C4orf46	Q504U0	113 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	SPINK9	Q5DT21	86 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	OR5B3	Q8NH48	314 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	LSM10	Q969L4	123 aa	Known RBP	13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	CCDC140	Q96MF4	163 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	FKBP11	Q9NYL4	201 aa		13.32	□□□□□ -0.28
IMP4-215	ENST00000477375	TRAV6	A0A075B6T7	132 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	PRAF2	O60831	178 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	DHFR	P00374	187 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	OR4E1	P0C645	316 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	VAMP1	P23763	118 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	THOC7	Q6I9Y2	204 aa	Known RBP	13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	ACSM6	Q6P461	480 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	IL22RA2	Q969J5	263 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	MARVELD1	Q9BSK0	173 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375	GPR61	Q9BZJ8	451 aa		13.31	□□□□□ -0.28
IMP4-215	ENST00000477375		K7EIL1	84 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	ST8SIA3	O43173	380 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	SFT2D2	O95562	160 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	HLA-A	P01891	365 aa	Known RBP	13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	HIST1H1B	P16401	226 aa	Known RBP	13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	ZP3	P21754	424 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	SYNJ2BP	P57105	145 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	HSPE1	P61604	102 aa	Known RBP	13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	PRCD	Q00LT1	54 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	TMEM268	Q5VZI3	342 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	SLC25A24	Q6NUK1	477 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	LGI3	Q8N145	548 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	GPR146	Q96CH1	333 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	GPN1	Q9HCN4	374 aa	Predicted RBP	13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	FLVCR2	Q9UPI3	526 aa		13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	F11R	Q9Y624	299 aa	Known RBP	13.3	□□□□□ -0.28
IMP4-215	ENST00000477375	PRKDC	P78527	4128 aa	Known RBP	13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	IGHV3-21	A0A0B4J1V1	117 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	INMT-MINDY4	F8WBC2	141 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	IL5	P05113	134 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	ANXA7	P20073	488 aa	Known RBP	13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	PPP1R1A	Q13522	171 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	CLEC19A	Q6UXS0	136 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	IL34	Q6ZMJ4	242 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	LYG2	Q86SG7	212 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	HAPLN4	Q86UW8	402 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	ZNF429	Q86V71	674 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	COQ8A	Q8NI60	647 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	RBPMS	Q93062	196 aa	Known RBP	13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	TMEM56	Q96MV1	263 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	TMEM56-RWDD3	S4R434	201 aa		13.29	□□□□□ -0.28
IMP4-215	ENST00000477375	DUXB	A0A1W2PPF3	345 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	C9orf170	A2RU37	121 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	SAP30	O75446	220 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	DHRS2	Q13268	280 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	RPEL1	Q2QD12	228 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	FAM219A	Q8IW50	185 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	OR2C3	Q8N628	320 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	RNASE11	Q8TAA1	199 aa	Known RBP	13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	EEF1AKMT3	Q96AZ1	226 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	RRNAD1	Q96FB5	475 aa	Known RBP	13.28	□□□□□ -0.28
IMP4-215	ENST00000477375	ZC4H2	Q9NQZ6	224 aa		13.28	□□□□□ -0.28
IMP4-215	ENST00000477375		A0A0B4J2A0	478 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	OR2C1	O95371	312 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	REC114	Q7Z4M0	266 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	LYZL2	Q7Z4W2	148 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	SLC35G3	Q8N808	338 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	LRTM2	Q8N967	370 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	ZNF502	Q8TBZ5	544 aa		13.27	□□□□□ -0.29
IMP4-215	ENST00000477375	MRAP	Q8TCY5	172 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms