RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
CLCNKA-205ENST00000477360 CXorf58Q96LI9 332 aa9.53□□□□□ -0.88
CLCNKA-205ENST00000477360 SHPKQ9UHJ6 478 aa9.53□□□□□ -0.88
CLCNKA-205ENST00000477360 IGLV11-55A0A075B6I3 123 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 TRAV6A0A075B6T7 132 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 TEX50A0A1B0GTY4 177 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 CGB1A6NKQ9 187 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 SEC14L6B5MCN3 397 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 E7EUB6 86 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 INMT-MINDY4F8WBC2 141 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 HLA-AP01891 365 aaKnown RBP9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 ANXA7P20073 488 aaKnown RBP9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 VAMP1P23763 118 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 OXA1LQ15070 435 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 TATDN3Q17R31 274 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 TRIM16LQ309B1 348 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 AARDQ4LEZ3 155 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 C1QL4Q86Z23 238 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 LGI3Q8N145 548 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 LHFPL5Q8TAF8 219 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 FANCD2OSQ96PS1 177 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 SIGLEC8Q9NYZ4 499 aa9.52□□□□□ -0.89
CLCNKA-205ENST00000477360 IGHV4OR15-8A0A075B7B6 117 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 A0A087WW49 117 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 TRBV7-1A0A0A6YYK4 115 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 TRAV3A0A0B4J244 114 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 SNRPGP15A8MWD9 76 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 HOXD3P31249 432 aaPredicted RBP9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 G6PCP35575 357 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 RAB25P57735 213 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 KLF5Q13887 457 aaPredicted RBP9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 C15orf32Q32M92 178 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 ACSM6Q6P461 480 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 SELENOHQ8IZQ5 122 aaKnown RBP9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 OR4A16Q8NH70 328 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 ZNF431Q8TF32 576 aaPredicted RBP9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 CASTOR1Q8WTX7 329 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 MITD1Q8WV92 249 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 ELOVL1Q9BW60 279 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 OR51B2Q9Y5P1 312 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 DNAH3Q8TD57 4116 aa9.51□□□□□ -0.89
CLCNKA-205ENST00000477360 C7orf66A4D0T2 115 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 HMX3A6NHT5 357 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 DBX1A6NMT0 343 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 IGKV1-5P01602 117 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 IGHV3-11P01762 117 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 DEFA4P12838 97 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 AREGP15514 252 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 SPNP16150 400 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 HSPE1P61604 102 aaKnown RBP9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 PRCDQ00LT1 54 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 ANKRD55Q3KP44 614 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 C4orf46Q504U0 113 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 TMEM268Q5VZI3 342 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 ZNF114Q8NC26 417 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 VN1R17PQ8TDU5 208 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 DLX4Q92988 240 aaPredicted RBP9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 RRNAD1Q96FB5 475 aaKnown RBP9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 OR5B12Q96R08 314 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 FBXL7Q9UJT9 491 aa9.5□□□□□ -0.89
CLCNKA-205ENST00000477360 APELAP0DMC3 54 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 SLC25A6P12236 298 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 AKR1C2P52895 323 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 WT1-ASQ06250 92 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 NMSQ5H8A3 153 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 SLC35G3Q8N808 338 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 OR1P1Q8NH06 330 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 GPN1Q9HCN4 374 aaPredicted RBP9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 AURKAIP1Q9NWT8 199 aaPredicted RBP9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 GAR1Q9NY12 217 aaKnown RBP9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 F11RQ9Y624 299 aaKnown RBP9.49□□□□□ -0.89
CLCNKA-205ENST00000477360 A0A0G2JRQ6 117 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 LGALS9O00182 355 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 RBMXL2O75526 392 aaKnown RBP9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 OR2J3O76001 311 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 OR13C7P0DN81 318 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 SLURP1P55000 103 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 RPEL1Q2QD12 228 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 LYZL2Q7Z4W2 148 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 OR9G4Q8NGQ1 327 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 OR4C12Q96R67 309 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 SEC22CQ9BRL7 303 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 DMRT1Q9Y5R6 373 aa9.48□□□□□ -0.89
CLCNKA-205ENST00000477360 A0A0B4J293 547 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 A0A1B0GU03 582 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 MYOD1P15172 320 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 KRTAP10-11P60412 298 aa9.47□□□□□ -0.89
CLCNKA-205ENST00000477360 ERHP84090 104 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms