RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 IMMP2LQ96T52 175 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 HINT2Q9BX68 163 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 CHODLQ9H9P2 273 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 NDUFB4O95168 129 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 IGKV1-16P04430 117 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 FAM71F2Q6NXP2 309 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 ZCCHC24Q8N2G6 241 aaKnown RBP13.41□□□□□ -0.26
TMEM53-208ENST00000476724 C8orf31Q8N9H6 132 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 OR4X1Q8NH49 305 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 TEX50A0A1B0GTY4 177 aa13.4□□□□□ -0.26
TMEM53-208ENST00000476724 SRRM4A7MD48 611 aaKnown RBP13.4□□□□□ -0.26
TMEM53-208ENST00000476724 GCHFRP30047 84 aa13.4□□□□□ -0.26
TMEM53-208ENST00000476724 LCN2P80188 198 aa13.4□□□□□ -0.26
TMEM53-208ENST00000476724 NECAP1Q8NC96 275 aa13.4□□□□□ -0.26
TMEM53-208ENST00000476724 OR1L8Q8NGR8 309 aa13.4□□□□□ -0.26
TMEM53-208ENST00000476724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.4□□□□□ -0.27
TMEM53-208ENST00000476724 E7EQL1 145 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 TNFRSF13BO14836 293 aaPredicted RBP13.4□□□□□ -0.27
TMEM53-208ENST00000476724 NDUFB3O43676 98 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 PLAUP00749 431 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 TYMSP04818 313 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 SOD3P08294 240 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM177Q53S58 311 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 LRRC10Q5BKY1 277 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM200BQ69YZ2 307 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 OR5AN1Q8NGI8 311 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM106BQ9NUM4 274 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 MIOXQ9UGB7 285 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.27
TMEM53-208ENST00000476724 SIAH2O43255 324 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 SAA1P0DJI8 122 aaPredicted RBP13.39□□□□□ -0.27
TMEM53-208ENST00000476724 UQCRFS1P47985 274 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 LINC00311Q8N616 119 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 OR4A5Q8NH83 315 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 ZNF596Q8TC21 504 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 SLC35E1Q96K37 410 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 C19orf24Q9BVV8 132 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 SLC45A2Q9UMX9 530 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 PKDREJQ9NTG1 2253 aa13.39□□□□□ -0.27
TMEM53-208ENST00000476724 HIVEP3Q5T1R4 2406 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 INS-IGF2F8WCM5 200 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 IGFBP2P18065 325 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM186Q96B77 213 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 PCGF1Q9BSM1 259 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 GPR61Q9BZJ8 451 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 SEPSECSQ9HD40 501 aaKnown RBP13.38□□□□□ -0.27
TMEM53-208ENST00000476724 ACACBO00763 2458 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 H0YJW9 148 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 LINC00869P0C866 280 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 MYOD1P15172 320 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 VSTM2AQ8TAG5 236 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 FLYWCH2Q96CP2 140 aaKnown RBP13.38□□□□□ -0.27
TMEM53-208ENST00000476724 HARBI1Q96MB7 349 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 UHRF2Q96PU4 802 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 MRPL20Q9BYC9 149 aaKnown RBP13.38□□□□□ -0.27
TMEM53-208ENST00000476724 COMMD5Q9GZQ3 224 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 KAAG1Q9UBP8 84 aa13.38□□□□□ -0.27
TMEM53-208ENST00000476724 AREGP15514 252 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 CCL3L1P16619 93 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 USF1P22415 310 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-208ENST00000476724 ERHP84090 104 aaKnown RBP13.37□□□□□ -0.27
TMEM53-208ENST00000476724 FOXL1Q12952 345 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 DNLZQ5SXM8 178 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 PDPNQ86YL7 162 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 PNKDQ8N490 385 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 OR10D4PQ8NGN7 298 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 CCL17Q92583 94 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 ELOVL1Q9BW60 279 aa13.37□□□□□ -0.27
TMEM53-208ENST00000476724 RNASE2P10153 161 aaKnown RBP13.36□□□□□ -0.27
TMEM53-208ENST00000476724 PYY3Q5JQD4 70 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
TMEM53-208ENST00000476724 GFI1BQ5VTD9 330 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM183AQ8IXX5 376 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 OR4P4Q8NGL7 312 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 OR4C13Q8NGP0 309 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 ACY3Q96HD9 319 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 NDUFA4L2Q9NRX3 87 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 FUT9Q9Y231 359 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 MDFIC2A0A1B0GVS7 189 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 A0A1W2PN81 502 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 CD3EP07766 207 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 GNLYP22749 145 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 CHRNA7P36544 502 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 GPX4P36969 197 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-208ENST00000476724 RPL8P62917 257 aaKnown RBP13.36□□□□□ -0.27
TMEM53-208ENST00000476724 FAM78BQ5VT40 261 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 OR5T1Q8NG75 326 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 H1FXQ92522 213 aaKnown RBP13.36□□□□□ -0.27
TMEM53-208ENST00000476724 C11orf52Q96A22 123 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 NABP2Q9BQ15 211 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 DERL1Q9BUN8 251 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 ZNRD1Q9P1U0 126 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 YTHDF2Q9Y5A9 579 aaKnown RBP13.36□□□□□ -0.27
TMEM53-208ENST00000476724 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
TMEM53-208ENST00000476724 ARFGEF3Q5TH69 2177 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms