RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 OR4D5Q8NGN0 318 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 OR5B12Q96R08 314 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 FBN3Q75N90 2809 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 PF4P02776 101 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 PRH1P02810 166 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 TRGV3P03979 118 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 CRYGCP07315 174 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 TRAPPC2P0DI81 140 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 TRAPPC2BP0DI82 140 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 UXS1Q8NBZ7 420 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 OR52E5Q8NH55 327 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 TMEM68Q96MH6 324 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 FANCD2OSQ96PS1 177 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 DUX3Q96PT4 197 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 HINT2Q9BX68 163 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 GNB4Q9HAV0 340 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 FKBP11Q9NYL4 201 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
CCNL1-217ENST00000476367 H2BFSP57053 126 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 ZNF491Q8N8L2 437 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 TMEM170AQ8WVE7 144 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 GPN1Q9HCN4 374 aaPredicted RBP11.17□□□□□ -0.62
CCNL1-217ENST00000476367 TRBV9A0A0B4J1U6 114 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 SIX6O95475 246 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 PSMB6P28072 239 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
CCNL1-217ENST00000476367 SPCS3P61009 180 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 ID3Q02535 119 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 C4orf3Q8WVX3 66 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 UBE2E2Q96LR5 201 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
CCNL1-217ENST00000476367 SLA2Q9H6Q3 261 aa11.17□□□□□ -0.62
CCNL1-217ENST00000476367 H3BUA1 57 aa11.16□□□□□ -0.62
CCNL1-217ENST00000476367 BRI3O95415 125 aa11.16□□□□□ -0.62
CCNL1-217ENST00000476367 OR13C7P0DN81 318 aa11.16□□□□□ -0.62
CCNL1-217ENST00000476367 CXCL3P19876 107 aa11.16□□□□□ -0.62
CCNL1-217ENST00000476367 IAH1Q2TAA2 248 aaPredicted RBP11.16□□□□□ -0.62
CCNL1-217ENST00000476367 ETV3LQ6ZN32 361 aa11.16□□□□□ -0.62
CCNL1-217ENST00000476367 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
CCNL1-217ENST00000476367 TMEM50AO95807 157 aa11.15□□□□□ -0.62
CCNL1-217ENST00000476367 IFNA17P01571 189 aa11.15□□□□□ -0.62
CCNL1-217ENST00000476367 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
CCNL1-217ENST00000476367 ZBTB8BQ8NAP8 495 aaPredicted RBP11.15□□□□□ -0.62
CCNL1-217ENST00000476367 OR11H7Q8NGC8 314 aa11.15□□□□□ -0.62
CCNL1-217ENST00000476367 P2RX4Q99571 388 aa11.15□□□□□ -0.62
CCNL1-217ENST00000476367 RBKSQ9H477 322 aa11.15□□□□□ -0.62
CCNL1-217ENST00000476367 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
CCNL1-217ENST00000476367 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
CCNL1-217ENST00000476367 THOC7Q6I9Y2 204 aaKnown RBP11.14□□□□□ -0.63
CCNL1-217ENST00000476367 OR1S1Q8NH92 325 aa11.14□□□□□ -0.63
CCNL1-217ENST00000476367 RAX2Q96IS3 184 aa11.14□□□□□ -0.63
CCNL1-217ENST00000476367 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
CCNL1-217ENST00000476367 C11orf1Q9H5F2 150 aa11.14□□□□□ -0.63
CCNL1-217ENST00000476367 C13orf42A0A1B0GVH6 325 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 CCL24O00175 119 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 GOSR2O14653 212 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 IFNA21P01568 189 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 MBPP02686 304 aaPredicted RBP11.13□□□□□ -0.63
CCNL1-217ENST00000476367 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
CCNL1-217ENST00000476367 DEFA4P12838 97 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 PAX9P55771 341 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 POLR2GP62487 172 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCNL1-217ENST00000476367 RHOGP84095 191 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 Q6ZNX1 250 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 ZNF114Q8NC26 417 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 RCL1Q9Y2P8 373 aaKnown RBP11.13□□□□□ -0.63
CCNL1-217ENST00000476367 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
CCNL1-217ENST00000476367 FAM90A26D6RGX4 464 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 I3L521 148 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 OR2J3O76001 311 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 LGALS1P09382 135 aaKnown RBP11.13□□□□□ -0.63
CCNL1-217ENST00000476367 FCN2Q15485 313 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 PDCD10Q9BUL8 212 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 PLEKHA3Q9HB20 300 aa11.13□□□□□ -0.63
CCNL1-217ENST00000476367 A0A0G2JLM5 398 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 FAM25EA8MYX2 175 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 SSNA1O43805 119 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 NDUFB8O95169 186 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 CD33P20138 364 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 HSD17B13Q7Z5P4 300 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-217ENST00000476367 MRPL41Q8IXM3 137 aaKnown RBP11.12□□□□□ -0.63
CCNL1-217ENST00000476367 DTD1Q8TEA8 209 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 GSKIPQ9P0R6 139 aa11.12□□□□□ -0.63
CCNL1-217ENST00000476367 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 SYNGR2O43760 224 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 MYCNOSP40205 109 aa11.11□□□□□ -0.63
CCNL1-217ENST00000476367 RRAS2P62070 204 aaPredicted RBP11.11□□□□□ -0.63
CCNL1-217ENST00000476367 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
CCNL1-217ENST00000476367 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms