RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 FAM212BQ9NTI7 297 aaPredicted RBP9.09□□□□□ -0.95
MSH5-SAPCD1-205ENST00000476085 TMEM14BQ9NUH8 114 aa9.09□□□□□ -0.95
MSH5-SAPCD1-205ENST00000476085 EHFQ9NZC4 300 aa9.09□□□□□ -0.95
MSH5-SAPCD1-205ENST00000476085 OR2T8A6NH00 312 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 DBX1A6NMT0 343 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RLN1P04808 185 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CTSGP08311 255 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RPA2P15927 270 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 ATF4P18848 351 aaPredicted RBP9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FCGR2BP31994 310 aaPredicted RBP9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 LPAR6P43657 344 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 TAS2R20P59543 309 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 HERV-K104P61576 105 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 ODF3L2Q3SX64 289 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SLC25A24Q6NUK1 477 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RBPMS2Q6ZRY4 209 aaKnown RBP9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 LSM10Q969L4 123 aaKnown RBP9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FXYD6Q9H0Q3 95 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 IFT46Q9NQC8 304 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 DAZ1Q9NQZ3 744 aaKnown RBP9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 KIR2DL5BA0A0G2JN68 375 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 KIR2DL5BA0A0G2JPC4 375 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 UBE2CO00762 179 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 KRASP01116 189 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 PMP2P02689 132 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 PRSS3P35030 304 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 G6PCP35575 357 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 TAS2R46P59540 309 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 KIR2DL5AQ8N109 375 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 OR5B3Q8NH48 314 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 KIR2DL5BQ8NHK3 375 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 GPX8Q8TED1 209 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 C15orf40Q8WUR7 153 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SEC22AQ96IW7 307 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 C21orf62Q9NYP8 219 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 NSG2Q9Y328 171 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 OR51B2Q9Y5P1 312 aa9.07□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 C15orf62A8K5M9 175 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 I3L2K1 104 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 GPR31O00270 319 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CYB5BO43169 146 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 IGKV1-39P01597 117 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 IGKV1D-39P04432 117 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 ERVK-16P61578 105 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CMTM1Q8IZ96 169 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SLC38A6Q8IZM9 456 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 OR6F1Q8NGZ6 308 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 OR1P1Q8NH06 330 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 LINC00476Q8WZB0 136 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RNF183Q96D59 192 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 OR10C1Q96KK4 312 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SCPEP1Q9HB40 452 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FKBP11Q9NYL4 201 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SMPXQ9UHP9 88 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 PRNDQ9UKY0 176 aa9.06□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 IGHV3-21A0A0B4J1V1 117 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 A0A0J9YWU9 116 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 C15orf61A6NNL5 157 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FAM25AB3EWG3 89 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FAM25CB3EWG5 89 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FAM25GB3EWG6 89 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SPRY2O43597 315 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 HPGDSO60760 199 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SNAPC5O75971 98 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 EIF4EP06730 217 aaKnown RBP9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 ELK1P19419 428 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 BMI1P35226 326 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 HRH1P35367 487 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 APOC4P55056 127 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 UCP3P55916 312 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 LAMTOR1Q6IAA8 161 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 ZNF114Q8NC26 417 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 OR5H2Q8NGV7 314 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CCDC59Q9P031 241 aaKnown RBP9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 UBQLN2Q9UHD9 624 aa9.05□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CHEK1O14757 476 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RGS5O15539 181 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 HLA-DMAP28067 261 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 SPCS2Q15005 226 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 PVRIGQ6DKI7 326 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 LYG2Q86SG7 212 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 GALNT14Q96FL9 552 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 TMEM56Q96MV1 263 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 TSC22D3Q99576 134 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 TXN2Q99757 166 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RABL2AQ9UBK7 228 aaPredicted RBP9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RABL2BQ9UNT1 228 aa9.04□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 IGHV3OR16-8A0A075B7F1 116 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 CCDC160A6NGH7 325 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 P0C879 139 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 DEFB135Q30KP9 77 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 LPCAT3Q6P1A2 487 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 DYNC2LI1Q8TCX1 351 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 RNF2Q99496 336 aa9.03□□□□□ -0.96
MSH5-SAPCD1-205ENST00000476085 HINT2Q9BX68 163 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms