RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 POC1AQ8NBT0 407 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 GDF15Q99988 308 aa9.26□□□□□ -0.93
VAPB-204ENST00000475243 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 OR13A1Q8NGR1 328 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 FBLIM1Q8WUP2 373 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 LINC01587Q99440 93 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 UQCR10Q9UDW1 63 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 TEX45Q8NA69 505 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 ARPC1AQ92747 370 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 SHANK1Q9Y566 2161 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 SRD5A1P18405 259 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 LY6DQ14210 128 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 NPCDR1Q9BY65 106 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 YAE1D1Q9NRH1 226 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 LYNX1G3V0Z9 82 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 LYNX1P0DP58 116 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
VAPB-204ENST00000475243 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 NPIPB4C9JG80 1138 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
VAPB-204ENST00000475243 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 MRPL20Q9BYC9 149 aaKnown RBP9.25□□□□□ -0.93
VAPB-204ENST00000475243 CHD3Q12873 2000 aaKnown RBP9.25□□□□□ -0.93
VAPB-204ENST00000475243 CCL3L1P16619 93 aa9.25□□□□□ -0.93
VAPB-204ENST00000475243 HBBP68871 147 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 PKDREJQ9NTG1 2253 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 EFEMP2O95967 443 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 CEACAM1P13688 526 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 WFDC12Q8WWY7 111 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 FAM131CQ96AQ9 280 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 C19orf24Q9BVV8 132 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 LHX2P50458 406 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 UCP3P55916 312 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 C1QTNF12Q5T7M4 302 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 IMMP2LQ96T52 175 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 DYSFO75923 2080 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 ZGRF1Q86YA3 2104 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 RAB9AP51151 201 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 LOC390937A0A1W2PQ73 354 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 PEX7O00628 323 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 FAM71F2Q6NXP2 309 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 CBLN4Q9NTU7 201 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 K7ERU9 68 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 NDUFA3O95167 84 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 GBF1Q92538 1859 aa9.24□□□□□ -0.93
VAPB-204ENST00000475243 A0A0G2JK05 382 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 COLCA1Q6ZS62 124 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 FAM57AQ8TBR7 257 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 C14orf144Q96I85 54 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 NBASA2RRP1 2371 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 ST6GALNAC6Q969X2 333 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 TTC32Q5I0X7 151 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 SAPCD1Q5SSQ6 148 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 NEU4Q8WWR8 484 aaPredicted RBP9.23□□□□□ -0.93
VAPB-204ENST00000475243 IFI27L2Q9H2X8 130 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 ERASQ7Z444 233 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 RCC1LQ96I51 464 aaKnown RBP9.23□□□□□ -0.93
VAPB-204ENST00000475243 C21orf62Q9NYP8 219 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 SPTAN1Q13813 2472 aaKnown RBP9.23□□□□□ -0.93
VAPB-204ENST00000475243 KBTBD11-OT1A0A1B0GTJ5 212 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 TM4SF5O14894 197 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 REC114Q7Z4M0 266 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 LINC00469Q8N7U9 141 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
VAPB-204ENST00000475243 SEMA5BQ9P283 1151 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 LRRC37AA6NMS7 1700 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 NPIPB9F8W1W9 429 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 NPIPB7O75200 414 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 LEMD1Q68G75 181 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 TRGV2A0A075B6R0 118 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 ASIPP42127 132 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 IGLV3-21P80748 117 aaPredicted RBP9.23□□□□□ -0.93
VAPB-204ENST00000475243 WDYHV1Q96HA8 205 aa9.23□□□□□ -0.93
VAPB-204ENST00000475243 TBL2Q9Y4P3 447 aaKnown RBP9.23□□□□□ -0.93
VAPB-204ENST00000475243 RIF1Q5UIP0 2472 aaKnown RBP9.22□□□□□ -0.93
VAPB-204ENST00000475243 FOXD3Q9UJU5 478 aaPredicted RBP9.22□□□□□ -0.93
VAPB-204ENST00000475243 KMT2EQ8IZD2 1858 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 APOHP02749 345 aaPredicted RBP9.22□□□□□ -0.93
VAPB-204ENST00000475243 UMODP07911 640 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 CD55P08174 381 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 GPX4P36969 197 aaPredicted RBP9.22□□□□□ -0.93
VAPB-204ENST00000475243 SHISA3A0PJX4 238 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 C17orf100A8MU93 164 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 ATP5G3P48201 142 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 TBR1Q16650 682 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 OR52E5Q8NH55 327 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 MRPL16Q9NX20 251 aaKnown RBP9.22□□□□□ -0.93
VAPB-204ENST00000475243 NHLRC3Q5JS37 347 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 MIR17HGQ75NE6 70 aa9.22□□□□□ -0.93
VAPB-204ENST00000475243 SCGB3A1Q96QR1 104 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms