RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 INMT-MINDY4F8WBC2 141 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 INS-IGF2F8WCM5 200 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 I3L521 148 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 HOXB5P09067 269 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 SULT1A3P0DMM9 295 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 SULT1A4P0DMN0 295 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 ANXA3P12429 323 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 CDX1P47902 265 aaPredicted RBP5.4□□□□□ -1.54
LIMD1-204ENST00000474665 DEFA1P59665 94 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 DEFA3P59666 94 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 SLC35B1P78383 322 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 SMCO1Q147U7 214 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 DEFB136Q30KP8 78 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 BSXQ3C1V8 233 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 NSUN5P1Q3KNT7 163 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 CXorf66Q5JRM2 361 aaPredicted RBP5.4□□□□□ -1.54
LIMD1-204ENST00000474665 KPRPQ5T749 579 aaPredicted RBP5.4□□□□□ -1.54
LIMD1-204ENST00000474665 PVRIGQ6DKI7 326 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 NDUFA11Q86Y39 141 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 OR2C3Q8N628 320 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 OR4X2Q8NGF9 303 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 OR5M8Q8NGP6 311 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 OR52E5Q8NH55 327 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 ZNF431Q8TF32 576 aaPredicted RBP5.4□□□□□ -1.54
LIMD1-204ENST00000474665 OR10C1Q96KK4 312 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 PHB2Q99623 299 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 SRSF8Q9BRL6 282 aaKnown RBP5.4□□□□□ -1.54
LIMD1-204ENST00000474665 HINT2Q9BX68 163 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 GON7Q9BXV9 100 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 FKBP11Q9NYL4 201 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 HSPB7Q9UBY9 170 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 TMED3Q9Y3Q3 217 aa5.4□□□□□ -1.54
LIMD1-204ENST00000474665 TSSC4Q9Y5U2 329 aaPredicted RBP5.4□□□□□ -1.54
LIMD1-204ENST00000474665 C7orf66A4D0T2 115 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 H3BUA1 57 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 CCSO14618 274 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 OR2J3O76001 311 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 ATG12O94817 140 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 NXPH3O95157 252 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 NDUFB8O95169 186 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 TMEM50AO95807 157 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 PTTG1O95997 202 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 TRBV12-3P01733 135 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 IGHV3-11P01762 117 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 TRGV3P03979 118 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 RNASE2P10153 161 aaKnown RBP5.39□□□□□ -1.55
LIMD1-204ENST00000474665 SLC25A6P12236 298 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 SPCS3P61009 180 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 RHOGP84095 191 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 TNFRSF9Q07011 255 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 IL15RAQ13261 267 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 OXA1LQ15070 435 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 PLET1Q6UQ28 207 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 C8orf86Q6ZUL3 223 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 C12orf45Q8N5I9 185 aaPredicted RBP5.39□□□□□ -1.55
LIMD1-204ENST00000474665 WDR89Q96FK6 387 aaPredicted RBP5.39□□□□□ -1.55
LIMD1-204ENST00000474665 ZNF414Q96IQ9 312 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 DUX3Q96PT4 197 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 OR5B12Q96R08 314 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 P2RX4Q99571 388 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 ZFP57Q9NU63 452 aa5.39□□□□□ -1.55
LIMD1-204ENST00000474665 COL7A1Q02388 2944 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 DYNC2H1Q8NCM8 4307 aaKnown RBP5.38□□□□□ -1.55
LIMD1-204ENST00000474665 MFSD2BA6NFX1 497 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 SNRPGP15A8MWD9 76 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 F8W735 103 aaPredicted RBP5.38□□□□□ -1.55
LIMD1-204ENST00000474665 K7EIM0 57 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 IFNA17P01571 189 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 TPPP2P59282 170 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 RUNX1Q01196 453 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 ID3Q02535 119 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 FHL3Q13643 280 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 TATDN3Q17R31 274 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 C15orf32Q32M92 178 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 KHDC1LQ5JSQ8 128 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 SAMD5Q5TGI4 173 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
LIMD1-204ENST00000474665 HSD17B13Q7Z5P4 300 aaPredicted RBP5.38□□□□□ -1.55
LIMD1-204ENST00000474665 ZNF114Q8NC26 417 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 NECAP1Q8NC96 275 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 KLHL30-AS1Q8NEE0 82 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 OR4D5Q8NGN0 318 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 OR1P1Q8NH06 330 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 COQ8AQ8NI60 647 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 RNASE11Q8TAA1 199 aaKnown RBP5.38□□□□□ -1.55
LIMD1-204ENST00000474665 C4orf3Q8WVX3 66 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 CCDC140Q96MF4 163 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 MAGT1Q9H0U3 335 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 RBKSQ9H477 322 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 SLA2Q9H6Q3 261 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 PLEKHA3Q9HB20 300 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 ZNF355PQ9NSJ1 428 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 F11RQ9Y624 299 aaKnown RBP5.38□□□□□ -1.55
LIMD1-204ENST00000474665 S4R3C0 116 aa5.38□□□□□ -1.55
LIMD1-204ENST00000474665 SACSQ9NZJ4 4579 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 IGHV4OR15-8A0A075B7B6 117 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 A0A087WW49 117 aa5.37□□□□□ -1.55
LIMD1-204ENST00000474665 I3L2K1 104 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms