RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 KIF24Q5T7B8 1368 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 A0A0D9SG52 128 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 LINC00854A0A1B0GVQ3 168 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 H0Y980 276 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 GOLGA6L19H0YKK7 550 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 TRAPPC2LH3BP13 241 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 CXCR6O00574 342 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 CETN3O15182 167 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 COCHO43405 550 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 HYPMO75409 117 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 DCTN3O75935 186 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 REG1AP05451 166 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 KRT7P08729 469 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 HTR1AP08908 422 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 COX5BP10606 129 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 ZNF80P51504 273 aaPredicted RBP0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 MAGOHP61326 146 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 NAA20P61599 178 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 UBE2IP63279 158 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 TNFAIP6P98066 277 aaPredicted RBP0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 KCNJ8Q15842 424 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 SYPL2Q5VXT5 272 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 Q6ZS49 121 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 C1orf158Q8N1D5 194 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 FAM19A2Q8N3H0 131 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 DEFB125Q8N687 156 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 MRPL30Q8TCC3 161 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 RAB8BQ92930 207 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 OR8D2Q9GZM6 311 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 WDR61Q9GZS3 305 aaKnown RBP0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 NUMA1Q14980 2115 aa0.74□□□□□ -2.29
ECHDC1-213ENST00000474240 PIK3R4Q99570 1358 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 EVC2Q86UK5 1308 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 SMIM23A6NLE4 172 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 KCNK1O00180 336 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 PSMD12O00232 456 aaPredicted RBP0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 PROSCO94903 275 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 IFNA10P01566 189 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 TNNC2P02585 160 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 ISG15P05161 165 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 CCL1P22362 96 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 SUPT4H1P63272 117 aaKnown RBP0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 CCL20P78556 96 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 KHDC3LQ587J8 217 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 HIST2H3PS2Q5TEC6 136 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 AADACL3Q5VUY0 350 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 LPCAT4Q643R3 524 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 LCN15Q6UWW0 184 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 TMEM156Q8N614 296 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 DNAJC9Q8WXX5 260 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 LINC00526Q96FQ7 95 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 PRTFDC1Q9NRG1 225 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 COL6A6A6NMZ7 2263 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 MYOFQ9NZM1 2061 aa0.73□□□□□ -2.29
ECHDC1-213ENST00000474240 INTS1Q8N201 2190 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 A0A0J9YY10 115 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 A0A1B0GX78 115 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 TCL1BO95988 128 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 CALB1P05937 261 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 CD79AP11912 226 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 RPS12P25398 132 aaKnown RBP0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 PRB3Q04118 309 aaPredicted RBP0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 CCDC122Q5T0U0 273 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 ZNF826PQ6ZT77 177 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 LRRC25Q8N386 305 aaPredicted RBP0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 C15orf53Q8NAA6 179 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 OR2T4Q8NH00 348 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 OR52E6Q96RD3 313 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 SLC50A1Q9BRV3 221 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 ULBP3Q9BZM4 244 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 SLC39A9Q9NUM3 307 aa0.72□□□□□ -2.29
ECHDC1-213ENST00000474240 HEATR5BQ9P2D3 2071 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 FADS1O60427 444 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 OR2B3O76000 313 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 COX6A1P12074 109 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 TCL1AP56279 114 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 RAB4BP61018 213 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 RAB5BP61020 215 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 HBA1P69905 142 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 CD200R1LQ6Q8B3 271 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 MIR17HGQ75NE6 70 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 BPIFA4PQ86YQ2 179 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 C9orf163Q8N9P6 203 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 C4orf3Q8WVX3 66 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 DERL1Q9BUN8 251 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 TMEM147Q9BVK8 224 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 MIXL1Q9H2W2 232 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 NHP2Q9NX24 153 aaKnown RBP0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 RASL12Q9NYN1 266 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 ATP6V1DQ9Y5K8 247 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 FREM1Q5H8C1 2179 aa0.71□□□□□ -2.3
ECHDC1-213ENST00000474240 TOPBP1Q92547 1522 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 OR5G3P0C626 314 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 BAALC-AS2P0C853 105 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 S100A4P26447 101 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 PSME3P61289 254 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 ZNF846Q147U1 533 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 HIST3H3Q16695 136 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 SPOPLQ6IQ16 392 aa0.7□□□□□ -2.3
ECHDC1-213ENST00000474240 TRAPPC6BQ86SZ2 158 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms