RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ZNF766Q5HY98 468 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF793Q6ZN11 406 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 KLHDC9Q8NEP7 349 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 OSR1Q8TAX0 266 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 C20orf78Q9BR46 151 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 NAA38Q9BRA0 125 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 MAP1LC3CQ9BXW4 147 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 NXT1Q9UKK6 140 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 HEBP2Q9Y5Z4 205 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 SELENOKQ9Y6D0 94 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 R4GN57 208 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 V9GYV3 84 aa4.23□□□□□ -1.73
TMEM39A-206ENST00000473684 TRBV20OR9-2A0A075B6H5 130 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 IGKV1D-8A0A087WSZ0 117 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A1W2PP11 408 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 MBD3L5A6NJ08 208 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 LMX1BO60663 402 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 NEURL1O76050 574 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 APOMO95445 188 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 C8orf89P0DMQ9 161 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 EVI2AP22794 236 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 FCGR2BP31994 310 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 NDUFV3P56181 108 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 HERV-K104P61576 105 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 DMRTC1Q5HYR2 192 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 FAM120AOSQ5T036 256 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 RNASEKQ6P5S7 137 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 LRRC25Q8N386 305 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 CDRT4Q8N9R6 151 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 OCC1Q8TAD7 63 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 GATAD1Q8WUU5 269 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 BADQ92934 168 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 RAB37Q96AX2 223 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 ADTRPQ96IZ2 230 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 ONECUT1Q9UBC0 465 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 ERRFI1Q9UJM3 462 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 SIGLEC9Q9Y336 463 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 FAM90A26D6RGX4 464 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM262E9PQX1 116 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 FNDC10F2Z333 226 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 OR2J3O76001 311 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 FGF6P10767 208 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 EGR2P11161 476 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 PVRP15151 417 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 GABRG2P18507 467 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 LINC01545Q5VT33 79 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 SH2D6Q7Z4S9 175 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 PIP4P1Q86T03 277 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 DCAF4L2Q8NA75 395 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 ARPC1AQ92747 370 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 FGF14Q92915 247 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 LIME1Q9H400 295 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 HILPDAQ9Y5L2 63 aa4.22□□□□□ -1.73
TMEM39A-206ENST00000473684 E9PLD3 99 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 C11orf98E9PRG8 122 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 CCDC179H3BU77 68 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 K7EQS6 105 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 KLK10O43240 276 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 OR7C1O76099 320 aaPredicted RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 NXPH3O95157 252 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 IFI6P09912 130 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 HMGA1P17096 107 aaKnown RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 FASLGP48023 281 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 FOXG1P55316 489 aaPredicted RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF121P58317 390 aaPredicted RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 FXYD4P59646 89 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 RPS15AP62244 130 aaKnown RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 PSG7Q13046 419 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 VGLL4Q14135 290 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 PRR30Q53SZ7 412 aaPredicted RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 PLPP4Q5VZY2 271 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 Q6Q795 121 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 MARCH3Q86UD3 253 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 OR5AS1Q8N127 324 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 TEX45Q8NA69 505 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 MRAPQ8TCY5 172 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 OR4C12Q96R67 309 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 R3HDMLQ9H3Y0 253 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF331Q9NQX6 463 aaPredicted RBP4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 SPANXCQ9NY87 97 aa4.21□□□□□ -1.73
TMEM39A-206ENST00000473684 CCL15-CCL14A0A0B4J2E2 113 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 KIR2DS1A0A191URI9 304 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 DUX1O43812 170 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 FRMD6-AS1P0C7T7 363 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 CTGFP29279 349 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 TAS2R45P59539 299 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 SLC35B1P78383 322 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 LY6DQ14210 128 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 KIR2DS1Q14954 304 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 MLF2Q15773 248 aaPredicted RBP4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 WDR5BQ86VZ2 330 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 KIR3DL3Q8N743 410 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 C11orf52Q96A22 123 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 S1PR5Q9H228 398 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 LYRM4Q9HD34 91 aa4.21□□□□□ -1.74
TMEM39A-206ENST00000473684 SOX21Q9Y651 276 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms