RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 DHFRP00374 187 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 MECP2P51608 486 aaKnown RBP13.87□□□□□ -0.19
SNX4-204ENST00000473417 SLURP1P55000 103 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 RBMS2Q15434 407 aaKnown RBP13.87□□□□□ -0.19
SNX4-204ENST00000473417 FAM223AQ8IWN6 122 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 NECAP1Q8NC96 275 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 DCUN1D4Q92564 292 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 FANCD2OSQ96PS1 177 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 C7orf50Q9BRJ6 194 aaKnown RBP13.87□□□□□ -0.19
SNX4-204ENST00000473417 CCDC32Q9BV29 185 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 ZNF256Q9Y2P7 627 aaPredicted RBP13.87□□□□□ -0.19
SNX4-204ENST00000473417 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
SNX4-204ENST00000473417 STAB2Q8WWQ8 2551 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 NDUFB6O95139 128 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 NDUFB8O95169 186 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 ANXA3P12429 323 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 BTCP35070 178 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 HSPE1P61604 102 aaKnown RBP13.86□□□□□ -0.19
SNX4-204ENST00000473417 C15orf32Q32M92 178 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 TMEM128Q5BJH2 165 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 SPINK9Q5DT21 86 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 Q6ZRM9 215 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
SNX4-204ENST00000473417 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
SNX4-204ENST00000473417 HIST1H1BP16401 226 aaKnown RBP13.85□□□□□ -0.19
SNX4-204ENST00000473417 VAMP1P23763 118 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 EXOSC2Q13868 293 aaKnown RBP13.85□□□□□ -0.19
SNX4-204ENST00000473417 ZNF343Q6P1L6 599 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 ZNF429Q86V71 674 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 FAM219AQ8IW50 185 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 SLC35G3Q8N808 338 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 DLX4Q92988 240 aaPredicted RBP13.85□□□□□ -0.19
SNX4-204ENST00000473417 IL22RA2Q969J5 263 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 GPR146Q96CH1 333 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 WWC2-AS2Q96NR7 200 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 RANGRFQ9HD47 186 aaPredicted RBP13.85□□□□□ -0.19
SNX4-204ENST00000473417 PEF1Q9UBV8 284 aaKnown RBP13.85□□□□□ -0.19
SNX4-204ENST00000473417 FLVCR2Q9UPI3 526 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 S4R3C0 116 aa13.85□□□□□ -0.19
SNX4-204ENST00000473417 IGLV11-55A0A075B6I3 123 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 ST8SIA3O43173 380 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 LYRM1O43325 122 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 IFNA17P01571 189 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 TRBV12-3P01733 135 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 IGHV3-23P01764 117 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 NHLRC4P0CG21 123 aaPredicted RBP13.84□□□□□ -0.19
SNX4-204ENST00000473417 PRCDQ00LT1 54 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 PPP1R1AQ13522 171 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 ZNF846Q147U1 533 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 SLC25A24Q6NUK1 477 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 LGI3Q8N145 548 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
SNX4-204ENST00000473417 PLEKHA3Q9HB20 300 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 DMRT1Q9Y5R6 373 aa13.84□□□□□ -0.19
SNX4-204ENST00000473417 KLK9Q2XQG4 91 aa13.83□□□□□ -0.2
SNX4-204ENST00000473417 LYZL2Q7Z4W2 148 aa13.83□□□□□ -0.2
SNX4-204ENST00000473417 CACNG5Q9UF02 275 aa13.83□□□□□ -0.2
SNX4-204ENST00000473417 KLK9Q9UKQ9 250 aa13.83□□□□□ -0.2
SNX4-204ENST00000473417 A0A0B4J2A0 478 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 SAP30O75446 220 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 SFT2D2O95562 160 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 MFAP2P55001 183 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 SRPXP78539 464 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 ANKRD55Q3KP44 614 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 ACSM6Q6P461 480 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 OR2C3Q8N628 320 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.82□□□□□ -0.2
SNX4-204ENST00000473417 SHPKQ9UHJ6 478 aa13.82□□□□□ -0.2
SNX4-204ENST00000473417 F11RQ9Y624 299 aaKnown RBP13.82□□□□□ -0.2
SNX4-204ENST00000473417 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.81□□□□□ -0.2
SNX4-204ENST00000473417 MFSD2BA6NFX1 497 aa13.81□□□□□ -0.2
SNX4-204ENST00000473417 CYB5BO43169 146 aa13.81□□□□□ -0.2
SNX4-204ENST00000473417 LY86O95711 162 aa13.81□□□□□ -0.2
SNX4-204ENST00000473417 ZP3P21754 424 aa13.81□□□□□ -0.2
SNX4-204ENST00000473417 ERHP84090 104 aaKnown RBP13.81□□□□□ -0.2
SNX4-204ENST00000473417 EEF1AKMT3Q96AZ1 226 aa13.81□□□□□ -0.2
SNX4-204ENST00000473417 THYN1Q9P016 225 aa13.81□□□□□ -0.2
SNX4-204ENST00000473417 NXPH3O95157 252 aa13.8□□□□□ -0.2
SNX4-204ENST00000473417 ANXA7P20073 488 aaKnown RBP13.8□□□□□ -0.2
SNX4-204ENST00000473417 HOXA1P49639 335 aaPredicted RBP13.8□□□□□ -0.2
SNX4-204ENST00000473417 CLEC19AQ6UXS0 136 aa13.8□□□□□ -0.2
SNX4-204ENST00000473417 CCDC140Q96MF4 163 aa13.8□□□□□ -0.2
SNX4-204ENST00000473417 U3KQK5 164 aa13.8□□□□□ -0.2
SNX4-204ENST00000473417 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 PPP5D1E7EU14 171 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 BMPR1BO00238 502 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 SULT1A3P0DMM9 295 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 SULT1A4P0DMN0 295 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 SPCS3P61009 180 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 UBE2MP61081 183 aaKnown RBP13.79□□□□□ -0.2
SNX4-204ENST00000473417 RPEL1Q2QD12 228 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 NMSQ5H8A3 153 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 OR1L6Q8NGR2 347 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 OR1P1Q8NH06 330 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 CXorf58Q96LI9 332 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 ENY2Q9NPA8 101 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 TBC1D24Q9ULP9 559 aa13.79□□□□□ -0.2
SNX4-204ENST00000473417 SMAD5-AS1Q9Y6J3 95 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms