RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CRYBB3P26998 211 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 RANP62826 216 aaKnown RBP17.29■□□□□ 0.36
COL18A1-207ENST00000473212 CENPWQ5EE01 88 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 FAM216AQ8WUB2 273 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 LRFN3Q9BTN0 628 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 IDI2-AS1Q9NZ38 188 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 LY96Q9Y6Y9 160 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 BSNQ9UPA5 3926 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 TEX43Q6ZNM6 134 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 ST6GALNAC3Q8NDV1 305 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 DEFB124Q8NES8 71 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 OR5AU1Q8NGC0 362 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 SARAFQ96BY9 339 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 SAMD10Q9BYL1 202 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 RAI1Q7Z5J4 1906 aaPredicted RBP17.29■□□□□ 0.36
COL18A1-207ENST00000473212 PKDREJQ9NTG1 2253 aa17.29■□□□□ 0.36
COL18A1-207ENST00000473212 HELTA6NFD8 242 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 GNG4P50150 75 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 DEFB109BQ30KR1 87 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 DOLPP1Q86YN1 238 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 VN1R17PQ8TDU5 208 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 PAM16Q9Y3D7 125 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 AREGP15514 252 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 GATA2P23769 480 aaPredicted RBP17.28■□□□□ 0.36
COL18A1-207ENST00000473212 RAB7AP51149 207 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 CASP6P55212 293 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 PQLC2Q6ZP29 291 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 LYG1Q8N1E2 194 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 NEUROG1Q92886 237 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 OR51B2Q9Y5P1 312 aa17.28■□□□□ 0.36
COL18A1-207ENST00000473212 ZNF474Q6S9Z5 364 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-207ENST00000473212 RNASE7Q9H1E1 156 aaKnown RBP17.27■□□□□ 0.36
COL18A1-207ENST00000473212 TANC2Q9HCD6 1990 aa17.27■□□□□ 0.36
COL18A1-207ENST00000473212 CGB3P0DN86 165 aa17.27■□□□□ 0.36
COL18A1-207ENST00000473212 CGB7P0DN87 165 aa17.27■□□□□ 0.36
COL18A1-207ENST00000473212 MLANAQ16655 118 aa17.27■□□□□ 0.36
COL18A1-207ENST00000473212 LOXL4Q96JB6 756 aa17.27■□□□□ 0.36
COL18A1-207ENST00000473212 NABP2Q9BQ15 211 aa17.27■□□□□ 0.36
COL18A1-207ENST00000473212 TRAV17A0A0B4J275 112 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 SLC35B1P78383 322 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 FAM103A1Q9BTL3 118 aaKnown RBP17.26■□□□□ 0.35
COL18A1-207ENST00000473212 SLC45A2Q9UMX9 530 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 MRPS11P82912 194 aaKnown RBP17.26■□□□□ 0.35
COL18A1-207ENST00000473212 Q0VG73 95 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 FXYD3Q14802 87 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 C20orf144Q9BQM9 153 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 GNB4Q9HAV0 340 aa17.26■□□□□ 0.35
COL18A1-207ENST00000473212 PLXNB1O43157 2135 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 IGKV1-16P04430 117 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 ASPHD1Q5U4P2 390 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 ZNF503Q96F45 646 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 GNB1LQ9BYB4 327 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 ASCL3Q9NQ33 180 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 IL19Q9UHD0 177 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 NAT8BQ9UHF3 227 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 RNF114Q9Y508 228 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 SPTBN2O15020 2390 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 IGKV1OR2-108A0A075B7D4 117 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 ZNF25P17030 456 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-207ENST00000473212 KIAA1644Q3SXP7 199 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 FAM216BQ8N7L0 139 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 CORO2AQ92828 525 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 MIEN1Q9BRT3 115 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 SLC25A10Q9UBX3 287 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-207ENST00000473212 NAV3Q8IVL0 2385 aa17.25■□□□□ 0.35
COL18A1-207ENST00000473212 J3QR06 171 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 OR7C2O60412 319 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 CFHR2P36980 270 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 TCL1AP56279 114 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 TMEM183BQ1AE95 376 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 VAMP8Q9BV40 100 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 PLEKHA3Q9HB20 300 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 TMEM167BQ9NRX6 74 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 KBTBD11-OT1A0A1B0GTJ5 212 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 SRRM4A7MD48 611 aaKnown RBP17.24■□□□□ 0.35
COL18A1-207ENST00000473212 LHBP01229 141 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 OR10J4P0C629 311 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 IRF2P14316 349 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 IGFL2Q6UWQ7 119 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 CCL13Q99616 98 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 SFXN3Q9BWM7 321 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 FBXL7Q9UJT9 491 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 PIEZO2Q9H5I5 2752 aa17.24■□□□□ 0.35
COL18A1-207ENST00000473212 TRBV9A0A0B4J1U6 114 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 COMPP49747 757 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-207ENST00000473212 SIGLECL1Q8N7X8 197 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 GCM1Q9NP62 436 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 TECRQ9NZ01 308 aaKnown RBP17.23■□□□□ 0.35
COL18A1-207ENST00000473212 A6NNC1 897 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 ITGB1BP1O14713 200 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 KLF3P57682 345 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-207ENST00000473212 CX3CL1P78423 397 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 RND1Q92730 232 aa17.23■□□□□ 0.35
COL18A1-207ENST00000473212 GGTLC3B5MD39 225 aa17.22■□□□□ 0.35
COL18A1-207ENST00000473212 FTH1P19P0C7X4 201 aa17.22■□□□□ 0.35
COL18A1-207ENST00000473212 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.22■□□□□ 0.35
COL18A1-207ENST00000473212 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
COL18A1-207ENST00000473212 GPX1P07203 203 aa17.22■□□□□ 0.35
COL18A1-207ENST00000473212 KRTDAPP60985 99 aa17.22■□□□□ 0.35
COL18A1-207ENST00000473212 TIGITQ495A1 244 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms