RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TMEM250H0YL14 139 aa12.19□□□□□ -0.46
UBXN11-213ENST00000472155 HNF1AP20823 631 aa12.19□□□□□ -0.46
UBXN11-213ENST00000472155 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
UBXN11-213ENST00000472155 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
UBXN11-213ENST00000472155 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
UBXN11-213ENST00000472155 CELSR1Q9NYQ6 3014 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 LGALS4P56470 323 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 LRRC10Q5BKY1 277 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 RUSC1-AS1Q66K80 236 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 OR5AN1Q8NGI8 311 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 MSRB2Q9Y3D2 182 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 LINC00869P0C866 280 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 APELAP0DMC3 54 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 MIR17HGQ75NE6 70 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 OR2T6Q8NHC8 308 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 NABP2Q9BQ15 211 aa12.18□□□□□ -0.46
UBXN11-213ENST00000472155 SCO2A0A1W2PP80 73 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
UBXN11-213ENST00000472155 CHRNA7P36544 502 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 GAMTQ14353 236 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 WNK2Q9Y3S1 2297 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 MPDU1O75352 247 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 REG1AP05451 166 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
UBXN11-213ENST00000472155 C1QTNF9P0C862 333 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 CNTFRP26992 372 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 APOBEC3AP31941 199 aaPredicted RBP12.17□□□□□ -0.46
UBXN11-213ENST00000472155 RBPJQ06330 500 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 PRSS8Q16651 343 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 ST6GALNAC6Q969X2 333 aa12.17□□□□□ -0.46
UBXN11-213ENST00000472155 CCL21O00585 134 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 PHOX2AO14813 284 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 CD3EP07766 207 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 RAB1CQ92928 201 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 BET1LQ9NYM9 111 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 IGLV2-23P01705 113 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 PRR20EP86478 221 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 PRR20CP86479 221 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 PRR20DP86480 221 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 PRR20BP86481 221 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 PRR20AP86496 221 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 OR10A7Q8NGE5 316 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 OR4P4Q8NGL7 312 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 FLYWCH2Q96CP2 140 aaKnown RBP12.16□□□□□ -0.46
UBXN11-213ENST00000472155 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
UBXN11-213ENST00000472155 LINC00587B1AMM8 73 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 SLC25A17O43808 307 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 IGHV1-8P0DP01 117 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 NHLH1Q02575 133 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 FAM78BQ5VT40 261 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 MORN5Q5VZ52 161 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 CDPF1Q6NVV7 123 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 ZNF430Q9H8G1 570 aaPredicted RBP12.15□□□□□ -0.46
UBXN11-213ENST00000472155 NDUFA4L2Q9NRX3 87 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 MRPL36Q9P0J6 103 aaKnown RBP12.15□□□□□ -0.46
UBXN11-213ENST00000472155 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 APOA2P02652 100 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 SOD3P08294 240 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 GCHFRP30047 84 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 OR10J1P30954 320 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
UBXN11-213ENST00000472155 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
UBXN11-213ENST00000472155 LINC00469Q8N7U9 141 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
UBXN11-213ENST00000472155 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
UBXN11-213ENST00000472155 GALR1P47211 349 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 ADORA2A-AS1P86434 159 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 LHFPL4Q7Z7J7 247 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 LINC01551Q86U37 167 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 MUC15Q8N387 334 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 ZNF503Q96F45 646 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 FNDC4Q9H6D8 234 aaPredicted RBP12.14□□□□□ -0.47
UBXN11-213ENST00000472155 NGBQ9NPG2 151 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 A0A1W2PPQ1 181 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 H7BYZ3 331 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 ENSAO43768 121 aaKnown RBP12.14□□□□□ -0.47
UBXN11-213ENST00000472155 CA7P43166 264 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 RPL29P47914 159 aaKnown RBP12.14□□□□□ -0.47
UBXN11-213ENST00000472155 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
UBXN11-213ENST00000472155 ACY3Q96HD9 319 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
UBXN11-213ENST00000472155 LY86O95711 162 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 HOXA5P20719 270 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 KAAG1Q9UBP8 84 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 B9A039 149 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 CXorf1O96002 111 aa12.13□□□□□ -0.47
UBXN11-213ENST00000472155 OR10J4P0C629 311 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms