RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MTUS2Q5JR59 1369 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 LINC00854A0A1B0GVQ3 168 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 DNAL4O96015 105 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 HTR1AP08908 422 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 MIFP14174 115 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 DDTP30046 118 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 FAM78BQ5VT40 261 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 DNM1P34Q6PK57 102 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 GKN2Q86XP6 184 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 PHF13Q86YI8 300 aaPredicted RBP-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 OR2T4Q8NH00 348 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 EFCAB1Q9HAE3 211 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 CKLFQ9UBR5 152 aa-0.45□□□□□ -2.48
PRPF40A-207ENST00000471701 MED12Q93074 2177 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 DMBT1Q9UGM3 2413 aaPredicted RBP-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 GOLGA6L19H0YKK7 550 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 TOX3O15405 576 aaPredicted RBP-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 PSG9Q00887 426 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 STX5Q13190 355 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 IBA57Q5T440 356 aaKnown RBP-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 HIST2H3AQ71DI3 136 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 DEFB128Q7Z7B8 93 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 CNPY4Q8N129 248 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 PFN4Q8NHR9 129 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 PRRT1Q99946 306 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 FAM103A1Q9BTL3 118 aaKnown RBP-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 TMEM147Q9BVK8 224 aa-0.46□□□□□ -2.48
PRPF40A-207ENST00000471701 IGSF10Q6WRI0 2623 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 CCDC160A6NGH7 325 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 OR2T8A6NH00 312 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 ZNF736B4DX44 427 aaPredicted RBP-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 M0R378 163 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 CCL25O15444 150 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 LYZL6O75951 148 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 HLA-DRAP01903 254 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 PRM2P04554 102 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 MAP3K7CLP57077 242 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 RHOGP84095 191 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 C1orf137Q5JT78 98 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 SPANXN5Q5MJ07 72 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 LPCAT4Q643R3 524 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 TEX261Q6UWH6 196 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 RASSF5Q8WWW0 418 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 PACRGQ96M98 296 aaPredicted RBP-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 SPACA1Q9HBV2 294 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 TAS2R4Q9NYW5 299 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 U3KQ87 197 aa-0.47□□□□□ -2.48
PRPF40A-207ENST00000471701 CITO14578 2027 aa-0.47□□□□□ -2.49
PRPF40A-207ENST00000471701 ANKRD17O75179 2603 aaKnown RBP-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 DOCK3Q8IZD9 2030 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 GOLGA8MH3BSY2 632 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 KCNK1O00180 336 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 MAP2K4P45985 399 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 FABP9Q0Z7S8 132 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 PPP1R1AQ13522 171 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 AADACL3Q5VUY0 350 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 CD302Q8IX05 232 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 TMEM161BQ8NDZ6 487 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 JOSD2Q8TAC2 188 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 SFT2D1Q8WV19 159 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 ROPN1LQ96C74 230 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 DHRS9Q9BPW9 319 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 TLNRD1Q9H1K6 362 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 RASL12Q9NYN1 266 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 DKKL1Q9UK85 242 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 TOPBP1Q92547 1522 aa-0.48□□□□□ -2.49
PRPF40A-207ENST00000471701 PHRF1Q9P1Y6 1649 aaKnown RBP-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 ZFYVE26Q68DK2 2539 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 TRAV12-1A0A0B4J245 112 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 A0A0J9YY10 115 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 A0A1B0GX78 115 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 F8VZ95 297 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 BIRC5O15392 142 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 UBL3O95164 117 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 KCNE1P15382 129 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 DEFB113Q30KQ7 82 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 BPIFA4PQ86YQ2 179 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 OPTNQ96CV9 577 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 SCGB3A1Q96QR1 104 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 DERL1Q9BUN8 251 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 ULBP3Q9BZM4 244 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 HDHD2Q9H0R4 259 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 TP73-AS1Q9UF72 201 aa-0.49□□□□□ -2.49
PRPF40A-207ENST00000471701 SCN3AQ9NY46 2000 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 DISC1C4P0D8 188 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 NDUFS6O75380 124 aaKnown RBP-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 IGKV1-5P01602 117 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 S100A9P06702 114 aaKnown RBP-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 IL3P08700 152 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 MGST1P10620 155 aaKnown RBP-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 UGT2B7P16662 529 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 CCL20P78556 96 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 PMS2P3Q13401 168 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 CLVS1Q8IUQ0 354 aaPredicted RBP-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 EXOC3-AS1Q8N2X6 119 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 OR4E2Q8NGC2 313 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 FKBP14Q9NWM8 211 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 RIC1Q4ADV7 1423 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 NCOR2Q9Y618 2525 aa-0.5□□□□□ -2.49
PRPF40A-207ENST00000471701 K7EIL1 84 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms