RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 OR4A16Q8NH70 328 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 OR1S1Q8NH92 325 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 RITA1Q96K30 269 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 OR10C1Q96KK4 312 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
SF3A1-206ENST00000471037 ASCL2Q99929 193 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 PLSCR3Q9NRY6 295 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 FKBP11Q9NYL4 201 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 METTL1Q9UBP6 276 aaKnown RBP7.04□□□□□ -1.28
SF3A1-206ENST00000471037 FOXA2Q9Y261 457 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-206ENST00000471037 SMAD5-AS1Q9Y6J3 95 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
SF3A1-206ENST00000471037 CCNKO75909 580 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 CNTFRP26992 372 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 MAS1LP35410 378 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 NKX2-1P43699 371 aaPredicted RBP7.03□□□□□ -1.28
SF3A1-206ENST00000471037 F2RL1P55085 397 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 RPL8P62917 257 aaKnown RBP7.03□□□□□ -1.28
SF3A1-206ENST00000471037 RUNX1Q01196 453 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 FGL1Q08830 312 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 IL15RAQ13261 267 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 PLGLAQ15195 96 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 IZUMO4Q1ZYL8 232 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 Q6ZRM9 215 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 PPP1R27Q86WC6 154 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 OR11H1Q8NG94 326 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 OR4D5Q8NGN0 318 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 OR52E5Q8NH55 327 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 RBMXL1Q96E39 390 aaKnown RBP7.03□□□□□ -1.28
SF3A1-206ENST00000471037 RASL11BQ9BPW5 248 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 HSPB9Q9BQS6 159 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 FBXL15Q9H469 300 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 TMEM14BQ9NUH8 114 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 GSKIPQ9P0R6 139 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 ZNF257Q9Y2Q1 563 aa7.03□□□□□ -1.28
SF3A1-206ENST00000471037 DNAH7Q8WXX0 4024 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 TRAV3A0A0B4J244 114 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 I3L521 148 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 ST8SIA3O43173 380 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 PFDN1O60925 122 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 MED6O75586 246 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 ACTL6BO94805 426 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 HLA-DRB1P01911 266 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 OR8U8P0C7N1 319 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 PET100P0DJ07 73 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 OR2B8PP59922 312 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 SPCS3P61009 180 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 TNFRSF9Q07011 255 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 PRSS8Q16651 343 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 ASPHD1Q5U4P2 390 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 SBSPONQ8IVN8 264 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 TCTE3Q8IZS6 198 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 OR5B3Q8NH48 314 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 PPP1R1CQ8WVI7 109 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 ST6GAL2Q96JF0 529 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 UBE2E2Q96LR5 201 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 RCHY1Q96PM5 261 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 NEURL2Q9BR09 285 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 QTRT1Q9BXR0 403 aaKnown RBP7.02□□□□□ -1.29
SF3A1-206ENST00000471037 COMMD5Q9GZQ3 224 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 ZNF430Q9H8G1 570 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-206ENST00000471037 RANGRFQ9HD47 186 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-206ENST00000471037 TPSG1Q9NRR2 321 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 HSPB7Q9UBY9 170 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 NSG2Q9Y328 171 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 OR51B2Q9Y5P1 312 aa7.02□□□□□ -1.29
SF3A1-206ENST00000471037 WRBO00258 174 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 LY86O95711 162 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 SCGB1D2O95969 90 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 IFNA17P01571 189 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 MBPP02686 304 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-206ENST00000471037 PSMB6P28072 239 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 PPIFP30405 207 aaKnown RBP7.01□□□□□ -1.29
SF3A1-206ENST00000471037 HSPE1P61604 102 aaKnown RBP7.01□□□□□ -1.29
SF3A1-206ENST00000471037 ID3Q02535 119 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 ZNF616Q08AN1 781 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 RAB32Q13637 225 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 KIAA0141Q14154 515 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-206ENST00000471037 MRGPRG-AS1Q2M3A8 158 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 ZNF491Q8N8L2 437 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 OR2T35Q8NGX2 323 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 TENM2Q9NT68 2774 aa7.01□□□□□ -1.29
SF3A1-206ENST00000471037 EPPK1P58107 5090 aaKnown RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 LCE6AA0A183 80 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 TEX50A0A1B0GTY4 177 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 K7EPK0 472 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 SYNGR2O43760 224 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 DEDDO75618 318 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 MPC2O95563 127 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 CA2P00918 260 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 IGLV1-40P01703 118 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 RLN2P04090 185 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 PVALBP20472 110 aaPredicted RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 RPL27AP46776 148 aaKnown RBP7□□□□□ -1.29
SF3A1-206ENST00000471037 S100A10P60903 97 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 PRCDQ00LT1 54 aa7□□□□□ -1.29
SF3A1-206ENST00000471037 PJVKQ0ZLH3 352 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms