RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PYHIN1Q6K0P9 492 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 LINC00596Q86U02 117 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM17Q86X19 198 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 Q8N402 240 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF439Q8NDP4 499 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 OR4P4Q8NGL7 312 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 OR13C8Q8NGS7 320 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 SMIM4Q8WVI0 70 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 PTX4Q96A99 478 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 RAB39BQ96DA2 213 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 MRPS24Q96EL2 167 aaKnown RBP2.87□□□□□ -1.95
COL9A1-206ENST00000470652 TSC22D3Q99576 134 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 MRPL20Q9BYC9 149 aaKnown RBP2.87□□□□□ -1.95
COL9A1-206ENST00000470652 IFI27L2Q9H2X8 130 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 HRASLSQ9HDD0 168 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 IFT46Q9NQC8 304 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 OR2S2Q9NQN1 319 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 DIABLOQ9NR28 239 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 CCL28Q9NRJ3 127 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 RDH8Q9NYR8 311 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 IDI2-AS1Q9NZ38 188 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 EHFQ9NZC4 300 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 MTFP1Q9UDX5 166 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 GLS2Q9UI32 602 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 ANXA10Q9UJ72 324 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 PSG11Q9UQ72 335 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 RBMX2Q9Y388 322 aaKnown RBP2.87□□□□□ -1.95
COL9A1-206ENST00000470652 HILPDAQ9Y5L2 63 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 TNCP24821 2201 aa2.87□□□□□ -1.95
COL9A1-206ENST00000470652 NIPBLQ6KC79 2804 aaeCLIP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TRAV6A0A075B6T7 132 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TRGV10A0A0A0MS01 117 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TRBV6-7A0A0A0MS04 114 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 A0A1B0GVG6 124 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 hADV38S2A0JD32 116 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ANKRD20A5PA0PJZ0 165 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF729A6NN14 1252 aaPredicted RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SERPINE3A8MV23 424 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ODF3BA8MYP8 253 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 B4DSR2 109 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 GABARAPH6UMI1 98 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 GSTZ1O43708 216 aaPredicted RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ENSAO43768 121 aaKnown RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CD5LO43866 347 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 FOXH1O75593 365 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 UPK1BO75841 260 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 RAB3DO95716 219 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ARG1P05089 322 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR8U9P0C7N5 309 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SAA2P0DJI9 122 aaPredicted RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR5H8P0DN80 308 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CD99P14209 185 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ZBTB25P24278 435 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ERP29P30040 261 aaKnown RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SAA4P35542 130 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ARPC4P59998 168 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CXCL6P80162 114 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SSX2Q16385 188 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 LY6EQ16553 131 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 HAGHQ16775 308 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 DEFB112Q30KQ8 113 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SP6Q3SY56 376 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 Q3ZCU0 254 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CHRFAM7AQ494W8 412 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SCGB2B2Q4G0G5 96 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 MORN2Q502X0 79 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 SPANXN2Q5MJ10 180 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 AADACL3Q5VUY0 350 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CYB5R2Q6BCY4 276 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 STEAP1BQ6NZ63 245 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 C2orf66Q6UXQ4 117 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 HEPN1Q6WQI6 88 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF818PQ6ZRF7 136 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 H1FOOQ8IZA3 346 aaPredicted RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 LINC00518Q8N0U6 118 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 VKORC1L1Q8N0U8 176 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR51S1Q8NGJ8 323 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR52B4Q8NGK2 314 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR5H2Q8NGV7 314 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR8U1Q8NH10 309 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 MARCH1Q8TCQ1 289 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CAPSLQ8WWF8 208 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM230Q96A57 120 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 CXorf58Q96LI9 332 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF251Q9BRH9 671 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF2Q9BSG1 426 aaPredicted RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 DNTTIP1Q9H147 329 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 OR2D2Q9H210 308 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM133Q9H2Q1 129 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ESM1Q9NQ30 184 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 MCUBQ9NWR8 336 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TAS2R8Q9NYW2 309 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 GNG12Q9UBI6 72 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF221Q9UK13 617 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 LINC00312Q9Y6C7 94 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 DNHD1Q96M86 4753 aa2.86□□□□□ -1.95
COL9A1-206ENST00000470652 FBN1P35555 2871 aaKnown RBP2.86□□□□□ -1.95
COL9A1-206ENST00000470652 TRBV6-6A0A0A6YYG2 114 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 A0A0A6YYH2 397 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 IGHV1-69DA0A0B4J2H0 117 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms