RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 MPV17LQ2QL34 196 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 TMEM182Q6ZP80 229 aaPredicted RBP6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 Q6ZS49 121 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 TCF23Q7RTU1 214 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 TBC1D26Q86UD7 250 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 SELENOHQ8IZQ5 122 aaKnown RBP6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 LINC00518Q8N0U6 118 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 C15orf54Q8N8G6 183 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 RNF152Q8N8N0 203 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 HSD17B11Q8NBQ5 300 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 DMBX1Q8NFW5 382 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR1N2Q8NGR9 330 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 FAM213BQ8TBF2 198 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 RXFP4Q8TDU9 374 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 ST6GALNAC6Q969X2 333 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 ABHD14BQ96IU4 210 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 TP53RKQ96S44 253 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 PBDC1Q9BVG4 233 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 PKIBQ9C010 78 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 SLC25A31Q9H0C2 315 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 TMEM222Q9H0R3 208 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 SPACA1Q9HBV2 294 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGSF23A1L1A6 192 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 NCBP2LA6PVI3 153 aaKnown RBP6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 A8MZ25 164 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 C1orf196B1AJZ1 125 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 C9JQL5 133 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 LY6LH3BQJ8 138 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 M0R036 132 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 WRBO00258 174 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 PITX3O75364 302 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 SPP1P10451 314 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 VDAC1P21796 283 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 S100GP29377 79 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 HOXA1P49639 335 aaPredicted RBP6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 RAB7AP51149 207 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 RAB5BP61020 215 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 NHLH2Q02577 135 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 HNF4GQ14541 408 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 PRAMEF5Q5TYX0 476 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 IQCF2Q8IXL9 164 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 Q8IYB0 196 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR2C3Q8N628 320 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 TPRX1Q8N7U7 411 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 LFNGQ8NES3 379 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 LYPD6BQ8NI32 183 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 CORO2AQ92828 525 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 TMEM56Q96MV1 263 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 EIF5A2Q9GZV4 153 aaKnown RBP6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 SH3BGRL3Q9H299 93 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 C11orf1Q9H5F2 150 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 RPS10P5Q9NQ39 176 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 TMEM56-RWDD3S4R434 201 aa6.92□□□□□ -1.3
SYNGAP1-205ENST00000470232 HSPB6O14558 160 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 HSPA12AO43301 675 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 SSSCA1O60232 199 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 TUSC2O75896 110 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 HAND1O96004 215 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 NAPSAO96009 420 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGHG4P01861 327 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 SCTP09683 121 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGHV4-30-4P0DP06 118 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 FOLR2P14207 255 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 ZNF44P15621 663 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 POLR2GP62487 172 aaKnown RBP eCLIP6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 HLA-DRB3P79483 266 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 RUNX1Q01196 453 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 CLINT1Q14677 625 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 ZNF818PQ6ZRF7 136 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 LINC00596Q86U02 117 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 TGIF2LXQ8IUE1 241 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 GAPTQ8N292 157 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR2G3Q8NGZ4 309 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR9G1Q8NH87 305 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 UBE2E2Q96LR5 201 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 RASL11BQ9BPW5 248 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 RIMS4Q9H426 269 aaPredicted RBP6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 CCL28Q9NRJ3 127 aa6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 LIN7CQ9NUP9 197 aaKnown RBP6.91□□□□□ -1.3
SYNGAP1-205ENST00000470232 A0A087X0M5 115 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGKV1D-13A0A0B4J2D9 117 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 A0A1B0GV50 99 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 A0A1B0GW64 132 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 A0A1B0GX30 115 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 PCP4L1A6NKN8 68 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 COLCA2A8K830 154 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 UMAD1C9J7I0 102 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 PSPNO60542 156 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 LY6G6CO95867 125 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGKV1D-33P01593 117 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGKV1-33P01594 117 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 IFNA4P05014 189 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGKV1-13P0DP09 117 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 UCP1P25874 307 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 PPP1CCP36873 323 aaKnown RBP6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 AKR1C3P42330 323 aa6.9□□□□□ -1.3
SYNGAP1-205ENST00000470232 KCNJ3P48549 501 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms