RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DEFA5Q01523 94 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 HNF4GQ14541 408 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 PLGLAQ15195 96 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 MMDQ15546 238 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 TNXAQ16473 311 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 ARSJQ5FYB0 599 aaPredicted RBP8.18□□□□□ -1.1
MSH5-213ENST00000468136 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
MSH5-213ENST00000468136 LRRC75A-AS1Q8N1F1 130 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 C1orf159Q96HA4 380 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 SCRT1Q9BWW7 348 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 GGTLC1Q9BX51 225 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 BEX4Q9NWD9 120 aaPredicted RBP8.18□□□□□ -1.1
MSH5-213ENST00000468136 VAX2Q9UIW0 290 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 ARL2-SNX15V9GYD0 113 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 IGHV3-72A0A0B4J1Y9 119 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 LOC102723971A0A1B0GUV8 181 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 IGLC7A0M8Q6 106 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 PRB1P04280 392 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 OR13C7P0DN81 318 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 BCL2P10415 239 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 ELLP55199 621 aaPredicted RBP8.17□□□□□ -1.1
MSH5-213ENST00000468136 BPIFB3P59826 476 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 B2MP61769 119 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 RHOBP62745 196 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 C5orf64Q2M2E5 130 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 SOHLH1Q5JUK2 328 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 ACSM6Q6P461 480 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 ZNF562Q6V9R5 426 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 SLC16A13Q7RTY0 426 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 SLC35E3Q7Z769 313 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
MSH5-213ENST00000468136 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
MSH5-213ENST00000468136 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 TBX15Q96SF7 602 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 MGST2Q99735 147 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 NKX6-2Q9C056 277 aaPredicted RBP8.17□□□□□ -1.1
MSH5-213ENST00000468136 SLC45A2Q9UMX9 530 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
MSH5-213ENST00000468136 PXMP4Q9Y6I8 212 aa8.17□□□□□ -1.1
MSH5-213ENST00000468136 TRAV20A0A0B4J274 112 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 B4DSR2 109 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 SCGB2A1O75556 95 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 CNIH1O95406 144 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 CXorf1O96002 111 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 IGKV1D-33P01593 117 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 IGKV1-33P01594 117 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 FABP1P07148 127 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 CRYGCP07315 174 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 TAS2R45P59539 299 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 PRR20EP86478 221 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 PRR20CP86479 221 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 PRR20DP86480 221 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 PRR20BP86481 221 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 PRR20AP86496 221 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 WT1-ASQ06250 92 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 MRGPRG-AS1Q2M3A8 158 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 LCN15Q6UWW0 184 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 S100A7AQ86SG5 101 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 Q8N6K4 173 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 THAP8Q8NA92 274 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 OR1L4Q8NGR5 311 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 GATAD1Q8WUU5 269 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 SRSF12Q8WXF0 261 aaKnown RBP8.16□□□□□ -1.1
MSH5-213ENST00000468136 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 MRPL32Q9BYC8 188 aaKnown RBP8.16□□□□□ -1.1
MSH5-213ENST00000468136 PRELID1Q9Y255 219 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 FAM96BQ9Y3D0 163 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 HILPDAQ9Y5L2 63 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 ZZEF1O43149 2961 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 USP24Q9UPU5 2620 aa8.16□□□□□ -1.1
MSH5-213ENST00000468136 TNCP24821 2201 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 CGB1A6NKQ9 187 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 J3QLI3 93 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 NPFFO15130 113 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 OPN1MWP04001 364 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 OPN1MW2P0DN77 364 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 OPN1MW3P0DN78 364 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
MSH5-213ENST00000468136 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.1
MSH5-213ENST00000468136 KLRD1Q13241 179 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 GAMTQ14353 236 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 HES1Q14469 280 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 RHEBQ15382 184 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 ZNF726P1Q15940 193 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 FAM122CQ6P4D5 195 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 STPG3Q8N7X2 389 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 TMEM116Q8NCL8 245 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 OR10W1Q8NGF6 305 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 PFDN5Q99471 154 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 TRGV9Q99603 122 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 FBXL15Q9H469 300 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 VSIRQ9H7M9 311 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 THYN1Q9P016 225 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 GNG13Q9P2W3 67 aa8.15□□□□□ -1.1
MSH5-213ENST00000468136 ITPR1Q14643 2758 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 TET2Q6N021 2002 aaPredicted RBP8.14□□□□□ -1.11
MSH5-213ENST00000468136 ELOA3CA0A087WX78 387 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms