RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 LRRC25Q8N386 305 aaPredicted RBP0.93□□□□□ -2.26
ATG3-204ENST00000467275 OR5B17Q8NGF7 314 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 OR8B3Q8NGG8 313 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 MRPL30Q8TCC3 161 aaKnown RBP0.93□□□□□ -2.26
ATG3-204ENST00000467275 MBD3L1Q8WWY6 194 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 PPP1R2P1Q96PQ5 205 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 CST9LQ9H4G1 147 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 VPS29Q9UBQ0 182 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 BAIAP2Q9UQB8 552 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 LHFPL6Q9Y693 200 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 KIF24Q5T7B8 1368 aa0.93□□□□□ -2.26
ATG3-204ENST00000467275 PLB1Q6P1J6 1458 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 ZNF106Q9H2Y7 1883 aaKnown RBP0.92□□□□□ -2.26
ATG3-204ENST00000467275 ARFGEF3Q5TH69 2177 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 IGKV1D-43A0A0B4J1Z2 117 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 TRBV6-5A0A0K0K1A5 114 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 HLA-DRB1P01911 266 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 CLPSP04118 112 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 CD79AP11912 226 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 PSME3P61289 254 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 SNRPD2P62316 118 aaKnown RBP0.92□□□□□ -2.26
ATG3-204ENST00000467275 FAM173BQ6P4H8 233 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 DCXRQ7Z4W1 244 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 C20orf196Q8IYI0 205 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 OR13C4Q8NGS5 318 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 RASSF5Q8WWW0 418 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 NIPSNAP1Q9BPW8 284 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 DERL1Q9BUN8 251 aa0.92□□□□□ -2.26
ATG3-204ENST00000467275 MRPL27Q9P0M9 148 aaKnown RBP0.92□□□□□ -2.26
ATG3-204ENST00000467275 ALPK2Q86TB3 2170 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 DOCK3Q8IZD9 2030 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 WRNQ14191 1432 aaPredicted RBP eCLIP0.91□□□□□ -2.26
ATG3-204ENST00000467275 IGKV2-29A2NJV5 120 aaPredicted RBP0.91□□□□□ -2.26
ATG3-204ENST00000467275 CLDN24A6NM45 220 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 PSMD12O00232 456 aaPredicted RBP0.91□□□□□ -2.26
ATG3-204ENST00000467275 KPNA3O00505 521 aaPredicted RBP0.91□□□□□ -2.26
ATG3-204ENST00000467275 FAAHO00519 579 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 CHP2O43745 196 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 IGKV1-5P01602 117 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 CRPP02741 224 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 RPS4Y1P22090 263 aaKnown RBP0.91□□□□□ -2.26
ATG3-204ENST00000467275 MYL6P60660 151 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 HBA1P69905 142 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 ITGB3BPQ13352 177 aaPredicted RBP0.91□□□□□ -2.26
ATG3-204ENST00000467275 ELOBQ15370 118 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 NNATQ16517 81 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 AADACL3Q5VUY0 350 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 RPL22L1Q6P5R6 122 aaKnown RBP0.91□□□□□ -2.26
ATG3-204ENST00000467275 CLDN22Q8N7P3 220 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 CCDC42Q96M95 316 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 PRTFDC1Q9NRG1 225 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 PKIGQ9Y2B9 76 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 MTUS2Q5JR59 1369 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 TONSLQ96HA7 1378 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 ANAPC1Q9H1A4 1944 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 PLXND1Q9Y4D7 1925 aa0.91□□□□□ -2.26
ATG3-204ENST00000467275 MYO3BQ8WXR4 1341 aa0.9□□□□□ -2.26
ATG3-204ENST00000467275 EXPH5Q8NEV8 1989 aa0.9□□□□□ -2.26
ATG3-204ENST00000467275 SDCBPO00560 298 aaPredicted RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 MRPS14O60783 128 aaKnown RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 LYPLA2O95372 231 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 TTRP02766 147 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 RPSAP08865 295 aaKnown RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 METTL15P1P0C7V9 234 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BOP23527 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BBP33778 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 RPL5P46777 297 aaKnown RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BDP58876 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 RPS20P60866 119 aaKnown RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BCP62807 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 AESQ08117 197 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 ZNF345Q14585 488 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 KCNJ8Q15842 424 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 NDUFA5Q16718 116 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST2H2BEQ16778 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 UNQ6190/PRO20217Q6UXQ8 127 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 TRAPPC5Q8IUR0 188 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 ZNF439Q8NDP4 499 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 MNS1Q8NEH6 495 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 C11orf40Q8WZ69 217 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BHQ93079 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 TMEM106AQ96A25 262 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BNQ99877 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 HIST1H2BMQ99879 126 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 FBXL12Q9NXK8 326 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 TP73-AS1Q9UF72 201 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 V9GYY5 206 aaPredicted RBP0.9□□□□□ -2.27
ATG3-204ENST00000467275 NUP155O75694 1391 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 GLI3P10071 1580 aa0.9□□□□□ -2.27
ATG3-204ENST00000467275 DLG5Q8TDM6 1919 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 COL6A6A6NMZ7 2263 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 EML6Q6ZMW3 1958 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 PQLC2LA1A4F0 135 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 RPP14O95059 124 aaKnown RBP0.89□□□□□ -2.27
ATG3-204ENST00000467275 PMP2P02689 132 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 ANGP03950 147 aaKnown RBP0.89□□□□□ -2.27
ATG3-204ENST00000467275 G6PCP35575 357 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 OMPP47874 163 aa0.89□□□□□ -2.27
ATG3-204ENST00000467275 CEBPGP53567 150 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms