RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SGMS2Q8NHU3 365 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 ZNF675Q8TD23 568 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 PYDC1Q8WXC3 89 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 DCUN1D1Q96GG9 259 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 ERMAPQ96PL5 475 aaPredicted RBP1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 XAGE1AQ9HD64 81 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 OPTCQ9UBM4 332 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 HHLA3Q9XRX5 114 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 DSCAMO60469 2012 aa1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 COL5A3P25940 1745 aaPredicted RBP1.77□□□□□ -2.13
CDC42BPA-211ENST00000466538 RTEL1-TNFRSF6BF6WH68 1400 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 SETD5Q9C0A6 1442 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 ARRDC5A6NEK1 342 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 PPP5D1E7EU14 171 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 GPR31O00270 319 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 PDE6DO43924 150 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 CAV1Q03135 178 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 MIAQ16674 131 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 TNFAIP8L3Q5GJ75 292 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 TMEM78Q5T7P6 136 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 C3orf33Q6P1S2 294 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 C20orf196Q8IYI0 205 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 BTF3L4Q96K17 158 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 ENY2Q9NPA8 101 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 GPR84Q9NQS5 396 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 UQCC1Q9NVA1 299 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 SS18L2Q9UHA2 77 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 FAM32AQ9Y421 112 aaKnown RBP1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 TMEM56-RWDD3S4R434 201 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 PCNX2A6NKB5 2137 aa1.76□□□□□ -2.13
CDC42BPA-211ENST00000466538 MIA2Q96PC5 1412 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 NCOA3Q9Y6Q9 1424 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 MAST2Q6P0Q8 1798 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 TRAV41A0A0B4J266 112 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 A0A1B0GV50 99 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 MDFIC2A0A1B0GVS7 189 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 PRORSD1PA6NEY8 169 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 ATG12O94817 140 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 ZNF682O95780 498 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 IFNA21P01568 189 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 IGKV1-16P04430 117 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 BPGMP07738 259 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 FAM228BP0C875 321 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 IFI30P13284 250 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 PSMB8P28062 276 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 SERPINB1P30740 379 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 CA5AP35218 305 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 RELAQ04206 551 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 HES1Q14469 280 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 KCNJ8Q15842 424 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 LYZL1Q6UWQ5 148 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 Q6ZTI0 123 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 GRINAQ7Z429 371 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 OR11H6Q8NGC7 330 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 OR4X2Q8NGF9 303 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 RASSF5Q8WWW0 418 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 KIFC1Q9BW19 673 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 PARVBQ9HBI1 364 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 BIN3Q9NQY0 253 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 RSL24D1Q9UHA3 163 aaKnown RBP1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 UTP11Q9Y3A2 253 aaKnown RBP1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 ICE1Q9Y2F5 2266 aa1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 ZNF106Q9H2Y7 1883 aaKnown RBP1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 NYNRINQ9P2P1 1898 aaKnown RBP1.75□□□□□ -2.13
CDC42BPA-211ENST00000466538 SCN10AQ9Y5Y9 1956 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 DENND4CQ5VZ89 1909 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 TRAPPC13A5PLN9 417 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 SIGLEC16A6NMB1 481 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 OVOL1O14753 267 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 HLA-DRB1P01911 266 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 CRHP06850 196 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 DEFA1P59665 94 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 RAB4BP61018 213 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 RHOBP62745 196 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 ERHP84090 104 aaKnown RBP1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 FABP9Q0Z7S8 132 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 ARHGAP11BQ3KRB8 267 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 PCOTHQ58A44 107 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 GOLT1AQ6ZVE7 132 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 C12orf29Q8N999 325 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 OR13D1Q8NGV5 346 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 MCFD2Q8NI22 146 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 ROPN1LQ96C74 230 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 CNBD2Q96M20 576 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 TMEM147Q9BVK8 224 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 TTTY13Q9BZ97 58 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 CXorf21Q9HAI6 301 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 LRTM1Q9HBL6 345 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 CISHQ9NSE2 258 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 TP73-AS1Q9UF72 201 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 PRNDQ9UKY0 176 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 PYCARDQ9ULZ3 195 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 TAF1LQ8IZX4 1826 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 ARHGAP32A7KAX9 2087 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 PLXND1Q9Y4D7 1925 aa1.74□□□□□ -2.13
CDC42BPA-211ENST00000466538 SIPA1L1O43166 1804 aa1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 XIRP1Q702N8 1843 aaKnown RBP1.73□□□□□ -2.13
CDC42BPA-211ENST00000466538 UBR2Q8IWV8 1755 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms