RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 XRCC3O43542 346 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 DEDDO75618 318 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 IGKV1-39P01597 117 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 IGKV1D-39P04432 117 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 FGF2P09038 288 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 BMI1P35226 326 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 APOC4P55056 127 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 TAS2R20P59543 309 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 PHLDA2Q53GA4 152 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 AIFM2Q9BRQ8 373 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 DIABLOQ9NR28 239 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 THYN1Q9P016 225 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 NUPR2A6NF83 97 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 CTSGP08311 255 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 CBX5P45973 191 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 ERVK-16P61578 105 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 Q56UQ5 140 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 DHRS11Q6UWP2 260 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 SLC38A6Q8IZM9 456 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 CD300LFQ8TDQ1 290 aa15.17■□□□□ 0.02
COL6A1-203ENST00000466285 DGCR14Q96DF8 476 aaKnown RBP15.17■□□□□ 0.02
COL6A1-203ENST00000466285 IGKV3-7A0A075B6H7 116 aa15.16■□□□□ 0.02
COL6A1-203ENST00000466285 NAT1P18440 290 aa15.16■□□□□ 0.02
COL6A1-203ENST00000466285 TFPI2P48307 235 aa15.16■□□□□ 0.02
COL6A1-203ENST00000466285 THOC7Q6I9Y2 204 aaKnown RBP15.16■□□□□ 0.02
COL6A1-203ENST00000466285 MRPS26Q9BYN8 205 aaKnown RBP15.16■□□□□ 0.02
COL6A1-203ENST00000466285 MAP6D1Q9H9H5 199 aa15.16■□□□□ 0.02
COL6A1-203ENST00000466285 TMEM14BQ9NUH8 114 aa15.16■□□□□ 0.02
COL6A1-203ENST00000466285 C15orf61A6NNL5 157 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 HRH1P35367 487 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 RPS19P39019 145 aaKnown RBP15.15■□□□□ 0.02
COL6A1-203ENST00000466285 ALDH3B2P48448 385 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 LSM3P62310 102 aaKnown RBP15.15■□□□□ 0.02
COL6A1-203ENST00000466285 IZUMO4Q1ZYL8 232 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 UBE2NLQ5JXB2 153 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 SPSB3Q6PJ21 355 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 LYSMD2Q8IV50 215 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 SAMD12Q8N8I0 201 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 OR5H2Q8NGV7 314 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 SMPXQ9UHP9 88 aa15.15■□□□□ 0.02
COL6A1-203ENST00000466285 IGHV7-4-1A0A0J9YVY3 117 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 OR4C46A6NHA9 309 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 I3L2K1 104 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 CHEK1O14757 476 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 EIF4EP06730 217 aaKnown RBP15.14■□□□□ 0.01
COL6A1-203ENST00000466285 HLA-DMAP28067 261 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 SPINK9Q5DT21 86 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 TMEM69Q5SWH9 247 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 HSD17B13Q7Z5P4 300 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-203ENST00000466285 STPG3Q8N7X2 389 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 YIPF6Q96EC8 236 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 MISP3Q96FF7 219 aa15.14■□□□□ 0.01
COL6A1-203ENST00000466285 KIR2DL5BA0A0G2JN68 375 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 KIR2DL5BA0A0G2JPC4 375 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 K7EMT4 169 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 GPR31O00270 319 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 KIR2DL5AQ8N109 375 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 LILRB2Q8N423 598 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 KIR2DL5BQ8NHK3 375 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 SLC25A46Q96AG3 418 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 RHPN1-AS1Q9BWJ2 59 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 VCX3AQ9NNX9 186 aa15.13■□□□□ 0.01
COL6A1-203ENST00000466285 C15orf62A8K5M9 175 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 UBE2CO00762 179 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 APOHP02749 345 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-203ENST00000466285 FAM90A2PQ658T7 463 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 LAMTOR1Q6IAA8 161 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 GBGT1Q8N5D6 347 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 FAM24BQ8N5W8 94 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 PHLDA1Q8WV24 401 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-203ENST00000466285 SEC22AQ96IW7 307 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 AGRNO00468 2067 aa15.12■□□□□ 0.01
COL6A1-203ENST00000466285 NUPL2O15504 423 aaKnown RBP15.11■□□□□ 0.01
COL6A1-203ENST00000466285 SNAPC5O75971 98 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 MT-CO2P00403 227 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 NANOS2P60321 138 aaKnown RBP15.11■□□□□ 0.01
COL6A1-203ENST00000466285 TBC1D26Q86UD7 250 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 TMEM116Q8NCL8 245 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 OR1P1Q8NH06 330 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 MRGPRFQ96AM1 343 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 GALNT14Q96FL9 552 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 S100A16Q96FQ6 103 aaKnown RBP15.11■□□□□ 0.01
COL6A1-203ENST00000466285 OR10C1Q96KK4 312 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 PRNDQ9UKY0 176 aa15.11■□□□□ 0.01
COL6A1-203ENST00000466285 IGHV3-66A0A0C4DH42 116 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 DEFB4AO15263 64 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 CYB5BO43169 146 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 TAS2R46P59540 309 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 GPX8Q8TED1 209 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 ST8SIA2Q92186 375 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 ATP6V0BQ99437 205 aa15.1■□□□□ 0.01
COL6A1-203ENST00000466285 YIF1AO95070 293 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 ATF4P18848 351 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-203ENST00000466285 PRR20EP86478 221 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 PRR20CP86479 221 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 PRR20DP86480 221 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 PRR20BP86481 221 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 PRR20AP86496 221 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 CADM3Q8N126 398 aa15.09■□□□□ 0.01
COL6A1-203ENST00000466285 BORCS5Q969J3 196 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms