RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 HCRTO43612 131 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 CLPSP04118 112 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 CALB1P05937 261 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 UBBP0CG47 229 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 EIF2B2P49770 351 aaKnown RBP1.03□□□□□ -2.24
LRCH3-211ENST00000466054 CDKL4Q5MAI5 379 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 LPCAT4Q643R3 524 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 RPL22L1Q6P5R6 122 aaKnown RBP1.03□□□□□ -2.24
LRCH3-211ENST00000466054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.03□□□□□ -2.24
LRCH3-211ENST00000466054 LRRC25Q8N386 305 aaPredicted RBP1.03□□□□□ -2.24
LRCH3-211ENST00000466054 MRPL30Q8TCC3 161 aaKnown RBP1.03□□□□□ -2.24
LRCH3-211ENST00000466054 TMEM106AQ96A25 262 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 SERPINI1Q99574 410 aa1.03□□□□□ -2.24
LRCH3-211ENST00000466054 EEF1E1-BLOC1S5C9J1V9 151 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 KCNK1O00180 336 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 TGOLN2O43493 480 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 SHBGP04278 402 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 RUNX1Q01196 453 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 AADACL3Q5VUY0 350 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 ALKAL1Q6UXT8 129 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 AAED1Q7RTV5 226 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 MCFD2Q8NI22 146 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 SLC35B4Q969S0 331 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 OR52E6Q96RD3 313 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 DERL1Q9BUN8 251 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 REG4Q9BYZ8 158 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 OR5AC2Q9NZP5 309 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 SNURFQ9Y675 71 aa1.02□□□□□ -2.25
LRCH3-211ENST00000466054 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 RNASE3P12724 160 aaKnown RBP1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BOP23527 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BBP33778 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BDP58876 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BCP62807 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 ZNF846Q147U1 533 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST2H2BEQ16778 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 SPANXN3Q5MJ09 141 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST2H3PS2Q5TEC6 136 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 DEFB128Q7Z7B8 93 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 IQCF2Q8IXL9 164 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 ZNF565Q8N9K5 539 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 OR13C4Q8NGS5 318 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BHQ93079 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BNQ99877 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H2BMQ99879 126 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 TRABDQ9H4I3 376 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 ARFGEF3Q5TH69 2177 aa1.01□□□□□ -2.25
LRCH3-211ENST00000466054 TTC21AQ8NDW8 1320 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 TMEM212A6NML5 194 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 OR5F1O95221 314 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 HTR1AP08908 422 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 HIST1H1EP10412 219 aaKnown RBP1□□□□□ -2.25
LRCH3-211ENST00000466054 CDK10Q15131 360 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 LCN15Q6UWW0 184 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 ZNF826PQ6ZT77 177 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 TMEM86BQ8N661 226 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 WFDC11Q8NEX6 87 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 OR51D1Q8NGF3 324 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 OR4D11Q8NGI4 311 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 OR2T4Q8NH00 348 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 DDI1Q8WTU0 396 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 ODF3Q96PU9 254 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 SCGB3A1Q96QR1 104 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 PRTFDC1Q9NRG1 225 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 CKLFQ9UBR5 152 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 KIF13BQ9NQT8 1826 aa1□□□□□ -2.25
LRCH3-211ENST00000466054 DIDO1Q9BTC0 2240 aaKnown RBP1□□□□□ -2.25
LRCH3-211ENST00000466054 CCDC88AQ3V6T2 1871 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 TRAV14DV4A0A0A6YYC5 116 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 CTAG1AP78358 180 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 OR2F1Q13607 317 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 KISS1Q15726 138 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 CCDC122Q5T0U0 273 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 MED12LQ86YW9 2145 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 C20orf196Q8IYI0 205 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 LINC00471Q8N535 108 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 PFN4Q8NHR9 129 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 IMP4Q96G21 291 aaKnown RBP0.99□□□□□ -2.25
LRCH3-211ENST00000466054 GUCA1BQ9UMX6 200 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 SNAPC4Q5SXM2 1469 aa0.99□□□□□ -2.25
LRCH3-211ENST00000466054 M0R036 132 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 PSMD12O00232 456 aaPredicted RBP0.98□□□□□ -2.25
LRCH3-211ENST00000466054 IFNA5P01569 189 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 IGKV1-5P01602 117 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 CD79AP11912 226 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 NKX2-5P52952 324 aaPredicted RBP0.98□□□□□ -2.25
LRCH3-211ENST00000466054 SPCS3P61009 180 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 PSME3P61289 254 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 HBA1P69905 142 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 DEFB115Q30KQ5 88 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 TEX36Q5VZQ5 186 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 OR4C6Q8NH72 309 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 AQP3Q92482 292 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 COMMD5Q9GZQ3 224 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 TOPBP1Q92547 1522 aa0.98□□□□□ -2.25
LRCH3-211ENST00000466054 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 ALPK2Q86TB3 2170 aa0.97□□□□□ -2.25
LRCH3-211ENST00000466054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.97□□□□□ -2.25
LRCH3-211ENST00000466054 A0A0D9SG52 128 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms