RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ACTL6BO94805 426 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 C1QTNF9P0C862 333 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 MEF2CQ06413 473 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 HIST3H2BBQ8N257 126 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 TACC2O95359 2948 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 DVL1O14640 695 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 LINC00869P0C866 280 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 PRR20EP86478 221 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 PRR20CP86479 221 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 PRR20DP86480 221 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 PRR20BP86481 221 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 PRR20AP86496 221 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 TMEM30BQ3MIR4 351 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 PYY3Q5JQD4 70 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 BET1LQ9NYM9 111 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 VENTXO95231 258 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 GCHFRP30047 84 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 GPX4P36969 197 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 RPL29P47914 159 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 MIR17HGQ75NE6 70 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 ANAPC16Q96DE5 110 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 OR5B12Q96R08 314 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 SRD5A3Q9H8P0 318 aa15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 GAR1Q9NY12 217 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-210ENST00000464987 K7ENP7 123 aa15.18■□□□□ 0.02
TSPAN4-210ENST00000464987 HNF1AP20823 631 aa15.18■□□□□ 0.02
TSPAN4-210ENST00000464987 DLX1P56177 255 aa15.18■□□□□ 0.02
TSPAN4-210ENST00000464987 FAM3BP58499 235 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-210ENST00000464987 OR4P4Q8NGL7 312 aa15.18■□□□□ 0.02
TSPAN4-210ENST00000464987 NDUFB3O43676 98 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 PLAUP00749 431 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 FAM78BQ5VT40 261 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 OR5AN1Q8NGI8 311 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 DYNLRB1Q9NP97 96 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 PPP1R2P9O14990 202 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 LOXP28300 417 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 RHOBP62745 196 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 GAMTQ14353 236 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 OR10D4PQ8NGN7 298 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 ZZEF1O43149 2961 aa15.17■□□□□ 0.02
TSPAN4-210ENST00000464987 PRB3Q04118 309 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 PRSS8Q16651 343 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 LRRC10Q5BKY1 277 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 C10orf55Q5SWW7 151 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 OR10X1Q8NGY0 326 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 OSR1Q8TAX0 266 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 SLC45A2Q9UMX9 530 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 F6UZH7 168 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 APOA2P02652 100 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 TMEM144Q7Z5S9 345 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 OR9G1Q8NH87 305 aa15.16■□□□□ 0.02
TSPAN4-210ENST00000464987 PPP5D1E7EU14 171 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 TGOLN2O43493 480 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 S100A2P29034 98 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 RAB31Q13636 194 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 C2orf83Q53S99 150 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 OR5B3Q8NH48 314 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 FLYWCH2Q96CP2 140 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 RITA1Q96K30 269 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 NABP2Q9BQ15 211 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 NDUFA4L2Q9NRX3 87 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 CSMD1Q96PZ7 3565 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 ABCA4P78363 2273 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 CGB1A6NKQ9 187 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 LYNX1G3V0Z9 82 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 LYNX1P0DP58 116 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 OR10J1P30954 320 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 DLX6P56179 175 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 TMEM177Q53S58 311 aa15.15■□□□□ 0.02
TSPAN4-210ENST00000464987 MALRD1Q5VYJ5 2156 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 TPRP12270 2363 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 GGCTO75223 188 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 FABP4P15090 132 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 RPL8P62917 257 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 OR2T10Q8NGZ9 312 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 OCC1Q8TAD7 63 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 LINC01560Q8TB33 94 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 ST6GALNAC6Q969X2 333 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 COMMD5Q9GZQ3 224 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 FKBP11Q9NYL4 201 aa15.14■□□□□ 0.01
TSPAN4-210ENST00000464987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 GRNP28799 593 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 SSBP2P81877 361 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 C11orf42Q8N5U0 333 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 OR2T6Q8NHC8 308 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 ZNF503Q96F45 646 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 RBM14Q96PK6 669 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 PFDN5Q99471 154 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 TPSG1Q9NRR2 321 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 NBASA2RRP1 2371 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 ELOA3CA0A087WX78 387 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 FNDC10F2Z333 226 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 IGLV2-23P01705 113 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 IGHV3-48P01763 117 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 RD3LP0DJH9 198 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 DEFA6Q01524 100 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 CD69Q07108 199 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 OR1L8Q8NGR8 309 aa15.13■□□□□ 0.01
TSPAN4-210ENST00000464987 IGHV3-72A0A0B4J1Y9 119 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms