RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 J3QQQ9 107 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 CREBL2O60519 120 aaPredicted RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 PGLYRP1O75594 196 aaPredicted RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 CNIH1O95406 144 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TNNC2P02585 160 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 CLPSP04118 112 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 SULT1A3P0DMM9 295 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 SULT1A4P0DMN0 295 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 MSNP26038 577 aaKnown RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 HAAOP46952 286 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 AP3S2P59780 193 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 RPS20P60866 119 aaKnown RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 RPL26P61254 145 aaKnown RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 HIST1H3AP68431 136 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 ERHP84090 104 aaKnown RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 H3F3AP84243 136 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 AKIRIN2Q53H80 203 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TMEM97Q5BJF2 176 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 C9orf64Q5T6V5 341 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TMEM42Q69YG0 159 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 ZNF705AQ6ZN79 300 aaPredicted RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 C9orf163Q8N9P6 203 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 PPP1R14BQ96C90 147 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 DCUN1D1Q96GG9 259 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 DOHHQ9BU89 302 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 FBXL12Q9NXK8 326 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 IDI2-AS1Q9NZ38 188 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TP73-AS1Q9UF72 201 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 RPL26L1Q9UNX3 145 aaKnown RBP0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 PKIGQ9Y2B9 76 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TIMM22Q9Y584 194 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TIMM9Q9Y5J7 89 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TMEM56-RWDD3S4R434 201 aa0.84□□□□□ -2.27
TM9SF3-203ENST00000464654 TRAV26-2A0A0B4J265 109 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 TRBV10-2A0A0K0K1G8 114 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 FAM236DA0A1B0GTK5 79 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 OR4C46A6NHA9 309 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 FABP5P3A8MUU1 101 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 CIAO1O76071 339 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 IFNA6P05013 189 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 SMIM10L2AP0DMW4 78 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 SMIM10L2BP0DMW5 78 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 FAM236CP0DP71 79 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 DEFA4P12838 97 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 NFYAP23511 347 aaPredicted RBP0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 FXYD2P54710 66 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 TMEM258P61165 79 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 KCNJ8Q15842 424 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 FAM27BQ5VT28 67 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 AADACL3Q5VUY0 350 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 RPL22L1Q6P5R6 122 aaKnown RBP0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 PFN4Q8NHR9 129 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 RASSF5Q8WWW0 418 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 ACOT12Q8WYK0 555 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 BORCS7Q96B45 105 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 TOMM6Q96B49 74 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 GLTPQ9NZD2 209 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 NAT8Q9UHE5 227 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 RP1P56715 2156 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 MYH11P35749 1972 aa0.83□□□□□ -2.28
TM9SF3-203ENST00000464654 EXOC1LA0A1B0GW35 172 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 MEIS3P1A6NDR6 274 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 DPRXA6NFQ7 191 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 GGT3PA6NGU5 568 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ZNF860A6NHJ4 632 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 SIGLEC16A6NMB1 481 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HMSDA8MTL9 139 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 IBA57-AS1B1ANH7 110 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 BUB1B-PAK6H3BSN5 160 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 C19orf84I3L1E1 186 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 SLC22A1O15245 554 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 OR2J2O76002 312 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ZNF682O95780 498 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 PPBPP02775 128 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ZNF705BP0CI00 300 aaPredicted RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 CYBAP13498 195 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BOP23527 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BBP33778 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 CAPZBP47756 277 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BDP58876 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BCP62807 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 SUPT4H1P63272 117 aaKnown RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HBA1P69905 142 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 MRPS15P82914 257 aaKnown RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 KISS1Q15726 138 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST2H2BEQ16778 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 C12orf74Q32Q52 190 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 LRRC28Q86X40 367 aaPredicted RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 OR6V1Q8N148 313 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ANKRD29Q8N6D5 301 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ZNF676Q8N7Q3 588 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 OR52L1Q8NGH7 329 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 H1FXQ92522 213 aaKnown RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BHQ93079 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ITFG2Q969R8 447 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 ZNF625Q96I27 306 aaPredicted RBP0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BNQ99877 126 aa0.82□□□□□ -2.28
TM9SF3-203ENST00000464654 HIST1H2BMQ99879 126 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms