RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	ZNF80	P51504	273 aa	Predicted RBP	0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	AADACL3	Q5VUY0	350 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	C8orf74	Q6P047	294 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	LCN15	Q6UWW0	184 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	TMEM106A	Q96A25	262 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	DERL1	Q9BUN8	251 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	YIPF3	Q9GZM5	350 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	TP73-AS1	Q9UF72	201 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	LSM5	Q9Y4Y9	91 aa	Known RBP	0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	C9orf84	Q5VXU9	1444 aa		0.96	□□□□□ -2.26
PTPN12-210	ENST00000464313	MICAL3	Q7RTP6	2002 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	HCRT	O43612	131 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	DCTN3	O75935	186 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	METTL15P1	P0C7V9	234 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	IL9	P15248	144 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	PLCXD2	Q0VAA5	305 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	C10orf55	Q5SWW7	151 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	LPCAT4	Q643R3	524 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	TMEM86B	Q8N661	226 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	WFDC11	Q8NEX6	87 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	C11orf40	Q8WZ69	217 aa		0.95	□□□□□ -2.26
PTPN12-210	ENST00000464313	MED12L	Q86YW9	2145 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	TRAV14DV4	A0A0A6YYC5	116 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313		A0A1B0GV50	99 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	KCNK1	O00180	336 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	SHBG	P04278	402 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	RNASE3	P12724	160 aa	Known RBP	0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313		Q6ZS49	121 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	AAED1	Q7RTV5	226 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	BPIFA4P	Q86YQ2	179 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	RASSF5	Q8WWW0	418 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	SLC35B4	Q969S0	331 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	OPTN	Q96CV9	577 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	ODF3	Q96PU9	254 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	SERPINI1	Q99574	410 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	MRPS26	Q9BYN8	205 aa	Known RBP	0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	PKIG	Q9Y2B9	76 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	RP1	P56715	2156 aa		0.94	□□□□□ -2.26
PTPN12-210	ENST00000464313	POLE	Q07864	2286 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	IGKV1D-42	A0A075B6H8	117 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	IGKV2D-26	A0A0A0MRZ7	120 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	IGKV1-5	P01602	117 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	OR5G3	P0C626	314 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	CRYGA	P11844	174 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BO	P23527	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BB	P33778	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BD	P58876	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	DEFA1	P59665	94 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BC	P62807	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HBA1	P69905	142 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST2H2BE	Q16778	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	ZNF565	Q8N9K5	539 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BH	Q93079	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	PPP1R2P1	Q96PQ5	205 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BN	Q99877	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H2BM	Q99879	126 aa		0.93	□□□□□ -2.26
PTPN12-210	ENST00000464313	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	IFNA5	P01569	189 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	HIST1H1E	P10412	219 aa	Known RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	FKBP2	P26885	142 aa	Known RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	IFITM2	Q01629	132 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	PRB3	Q04118	309 aa	Predicted RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	RPL22L1	Q6P5R6	122 aa	Known RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313		Q6ZQT0	140 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	IQCF2	Q8IXL9	164 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	MRPL30	Q8TCC3	161 aa	Known RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	AQP3	Q92482	292 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	C11orf68	Q9H3H3	251 aa	Known RBP	0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	GUCA1B	Q9UMX6	200 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	C22orf24	Q9Y442	160 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	STRC	Q7RTU9	1775 aa		0.92	□□□□□ -2.26
PTPN12-210	ENST00000464313	EIF4G1	Q04637	1599 aa	Known RBP	0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	TECTA	O75443	2155 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	CTSD	P07339	412 aa	Predicted RBP	0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	NKX2-5	P52952	324 aa	Predicted RBP	0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	SPCS3	P61009	180 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	UBE2I	P63279	158 aa	Known RBP	0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	STX5	Q13190	355 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	OR2F1	Q13607	317 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	KCNJ8	Q15842	424 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	CLVS1	Q8IUQ0	354 aa	Predicted RBP	0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	C1orf158	Q8N1D5	194 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	C12orf29	Q8N999	325 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	PFN4	Q8NHR9	129 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	MCFD2	Q8NI22	146 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	TRABD	Q9H4I3	376 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	FBXL12	Q9NXK8	326 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	SNURF	Q9Y675	71 aa		0.91	□□□□□ -2.26
PTPN12-210	ENST00000464313	FAAH	O00519	579 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	OR5F1	O95221	314 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	HLA-DRB1	P01911	266 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	HTR1A	P08908	422 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	SPI1	P17947	270 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	HIST1H1T	P22492	207 aa	Predicted RBP	0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	RPS20	P60866	119 aa	Known RBP	0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	DNAJC9	Q8WXX5	260 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	SCGB3A1	Q96QR1	104 aa		0.9	□□□□□ -2.27
PTPN12-210	ENST00000464313	GINS4	Q9BRT9	223 aa		0.9	□□□□□ -2.27

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