RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 FAM90A2PQ658T7 463 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 TMEM17Q86X19 198 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 UBAC2Q8NBM4 344 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 TMEM116Q8NCL8 245 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 PKHD1P08F94 4074 aa12.64□□□□□ -0.39
HMGN1-210ENST00000464078 IGHV3-21A0A0B4J1V1 117 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 MRPS14O60783 128 aaKnown RBP12.63□□□□□ -0.39
HMGN1-210ENST00000464078 CD5P06127 495 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 F2RP25116 425 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 OR5AP2Q8NGF4 316 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 OR1P1Q8NH06 330 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 HRH4Q9H3N8 390 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 APLNQ9ULZ1 77 aa12.63□□□□□ -0.39
HMGN1-210ENST00000464078 RRP15Q9Y3B9 282 aaKnown RBP12.63□□□□□ -0.39
HMGN1-210ENST00000464078 FAT2Q9NYQ8 4349 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 TRAV18A0A075B6X5 111 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 NUPL2O15504 423 aaKnown RBP12.62□□□□□ -0.39
HMGN1-210ENST00000464078 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-210ENST00000464078 GNRHRP30968 328 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 UBE2UQ5VVX9 321 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 DGCR14Q96DF8 476 aaKnown RBP12.62□□□□□ -0.39
HMGN1-210ENST00000464078 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 HINT2Q9BX68 163 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 OR51B2Q9Y5P1 312 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 RYR1P21817 5038 aa12.62□□□□□ -0.39
HMGN1-210ENST00000464078 C15orf61A6NNL5 157 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 RLN1P04808 185 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 CBX5P45973 191 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 TFPI2P48307 235 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 TMEM187Q14656 261 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 CMTM3Q96MX0 182 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 TXN2Q99757 166 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 AUNIPQ9H7T9 357 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 TMEM14BQ9NUH8 114 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 PRNDQ9UKY0 176 aa12.61□□□□□ -0.39
HMGN1-210ENST00000464078 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 I3L2K1 104 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 SNAPC5O75971 98 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 DFFBO76075 338 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 GABARAPL2P60520 117 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 HERV-K104P61576 105 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 LINC00336Q6ZUF6 198 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 Q8NAQ8 132 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 OR5H6Q8NGV6 325 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 FCAMRQ8WWV6 532 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
HMGN1-210ENST00000464078 FKBP11Q9NYL4 201 aa12.6□□□□□ -0.39
HMGN1-210ENST00000464078 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 TRAV2A0A0B4J234 112 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 YIF1AO95070 293 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 KRASP01116 189 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 HSPA13P48723 471 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 MOB3AQ96BX8 217 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 CNBD2Q96M20 576 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 TSC22D3Q99576 134 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 NSG2Q9Y328 171 aa12.59□□□□□ -0.39
HMGN1-210ENST00000464078 IGKV3-7A0A075B6H7 116 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 IGLL5B9A064 214 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 DEFB4AO15263 64 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-210ENST00000464078 SDC2P34741 201 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 G6PCP35575 357 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 LPAR6P43657 344 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 MFAP4P55083 255 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 DHRS11Q6UWP2 260 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 GBGT1Q8N5D6 347 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 SLC25A46Q96AG3 418 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 GINS3Q9BRX5 216 aa12.58□□□□□ -0.4
HMGN1-210ENST00000464078 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 DBX1A6NMT0 343 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 PSMB9P28065 219 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 TMEM41BQ5BJD5 291 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 CMTM1Q8IZ96 169 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 FCGR1BQ92637 280 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 MS4A6AQ9H2W1 248 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 DIABLOQ9NR28 239 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 FAM212BQ9NTI7 297 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-210ENST00000464078 EHFQ9NZC4 300 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 ANAPC10Q9UM13 185 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
HMGN1-210ENST00000464078 DNAH17Q9UFH2 4485 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 IGHV3OR16-13A0A075B7E8 117 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 A0A1B0GVY2 172 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 EIF4EP06730 217 aaKnown RBP12.56□□□□□ -0.4
HMGN1-210ENST00000464078 FCER2P06734 321 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 IZUMO2Q6UXV1 221 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 TSPAN14Q8NG11 270 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 ST8SIA2Q92186 375 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 MISP3Q96FF7 219 aa12.56□□□□□ -0.4
HMGN1-210ENST00000464078 GNG7O60262 68 aa12.55□□□□□ -0.4
HMGN1-210ENST00000464078 TMEM127O75204 238 aa12.55□□□□□ -0.4
HMGN1-210ENST00000464078 MT-CO2P00403 227 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms