RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 NDUFA7O95182 113 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 IFNA10P01566 189 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 EGR2P11161 476 aaPredicted RBP8.42□□□□□ -1.06
RTF1-202ENST00000462276 HIST1H1BP16401 226 aaKnown RBP8.42□□□□□ -1.06
RTF1-202ENST00000462276 CTRB1P17538 263 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 WT1-ASQ06250 92 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 BAXQ07812 192 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 KLK9Q2XQG4 91 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 ZFP69Q49AA0 526 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 C9orf152Q5JTZ5 239 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 CTRB2Q6GPI1 263 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 ZNF546Q86UE3 836 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 SLC24A4Q8NFF2 622 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
RTF1-202ENST00000462276 HSPB9Q9BQS6 159 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 C11orf1Q9H5F2 150 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 C16orf95Q9H693 158 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 PARP11Q9NR21 331 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 THYN1Q9P016 225 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 MBD2Q9UBB5 411 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 KLK9Q9UKQ9 250 aa8.42□□□□□ -1.06
RTF1-202ENST00000462276 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 TRAV14DV4A0A0A6YYC5 116 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 A0A1B0GW64 132 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 TMEM50AO95807 157 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 DEFA4P12838 97 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 MYOD1P15172 320 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 C4BPBP20851 252 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 NPY1RP25929 384 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 CAV2P51636 162 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 PAX9P55771 341 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 HBG1P69891 147 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 HBG2P69892 147 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 SLC35B1P78383 322 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 NDPQ00604 133 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
RTF1-202ENST00000462276 SPANXN5Q5MJ07 72 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 UNQ5815/PRO19632Q6UWF5 114 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 TMEM14EPQ6UXP3 125 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 ACOT7LQ6ZUV0 252 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 STX12Q86Y82 276 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 COMMD1Q8N668 190 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 LFNGQ8NES3 379 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 OR10W1Q8NGF6 305 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 FAM110DQ8TAY7 271 aaPredicted RBP8.41□□□□□ -1.06
RTF1-202ENST00000462276 DCUN1D4Q92564 292 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 AQP10Q96PS8 301 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 DUX5Q96PT3 197 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 ZNF702PQ9H963 129 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 OR5AC2Q9NZP5 309 aa8.41□□□□□ -1.06
RTF1-202ENST00000462276 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
RTF1-202ENST00000462276 FXYD6-FXYD2A0A087WZ82 144 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 A0A1B0GUS0 222 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 G3V3Q6 166 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 FBXO24O75426 580 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 NXPH3O95157 252 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 IFNA4P05014 189 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 OR8U8P0C7N1 319 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 RNASE2P10153 161 aaKnown RBP8.4□□□□□ -1.06
RTF1-202ENST00000462276 IAPPP10997 89 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 AREGP15514 252 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 RPL12P30050 165 aaKnown RBP8.4□□□□□ -1.06
RTF1-202ENST00000462276 SULT1A1P50225 295 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 OR2F1Q13607 317 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 EXOSC2Q13868 293 aaKnown RBP8.4□□□□□ -1.06
RTF1-202ENST00000462276 C19orf54Q5BKX5 351 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 Q5BKY6 102 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 STPG2Q8N412 459 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 TMEM252Q8N6L7 170 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 OR10P1Q8NGE3 313 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 OR4F5Q8NH21 305 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 CACNG8Q8WXS5 425 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 PINX1Q96BK5 328 aaKnown RBP8.4□□□□□ -1.06
RTF1-202ENST00000462276 P2RX4Q99571 388 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 GGACTQ9BVM4 153 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 WNT10AQ9GZT5 417 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 SLA2Q9H6Q3 261 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 TNFSF18Q9UNG2 199 aa8.4□□□□□ -1.06
RTF1-202ENST00000462276 A0A0D9SG52 128 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 RPS10-NUDT3A0A1W2PQS6 291 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 FNDC10F2Z333 226 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
RTF1-202ENST00000462276 S100A11P31949 105 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 GPX4P36969 197 aaPredicted RBP8.39□□□□□ -1.07
RTF1-202ENST00000462276 ZNF345Q14585 488 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 ATP6V1FQ16864 119 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 SPINK9Q5DT21 86 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 FAM209BQ5JX69 171 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 ASPHD1Q5U4P2 390 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 ETV3LQ6ZN32 361 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 FAM103A1Q9BTL3 118 aaKnown RBP8.39□□□□□ -1.07
RTF1-202ENST00000462276 MFFQ9GZY8 342 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 ZC4H2Q9NQZ6 224 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 FBXO7Q9Y3I1 522 aa8.39□□□□□ -1.07
RTF1-202ENST00000462276 FAM24AA6NFZ4 105 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms