RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 GZMHP20718 246 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 PSMB6P28072 239 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 FCGR2CP31995 323 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 PPP1CCP36873 323 aaKnown RBP3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ARHGDIBP52566 201 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 DLX1P56177 255 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 DSCR9P59020 149 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 FXYD4P59646 89 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 TSPAN5P62079 268 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 MEF2CQ06413 473 aaPredicted RBP3.68□□□□□ -1.82
CSMD3-205ENST00000462254 BAMBIQ13145 260 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM187Q14656 261 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 LTC4SQ16873 150 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 TRIM16LQ309B1 348 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 SCGB2B2Q4G0G5 96 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 PVRIGQ6DKI7 326 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ADAMTSL5Q6ZMM2 481 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF600Q6ZNG1 722 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 IDO2Q6ZQW0 420 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 SLC7A5P1Q8MH63 180 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF439Q8NDP4 499 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 OR10V1Q8NGI7 309 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ENKURQ8TC29 256 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 TMED6Q8WW62 240 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 GALMQ96C23 342 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF714Q96N38 554 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 RCHY1Q96PM5 261 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ATP5SQ99766 215 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 PRRT1Q99946 306 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF2Q9BSG1 426 aaPredicted RBP3.68□□□□□ -1.82
CSMD3-205ENST00000462254 TOLLIPQ9H0E2 274 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 C20orf85Q9H1P6 137 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 MMP28Q9H239 520 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 PLEKHA3Q9HB20 300 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ESM1Q9NQ30 184 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ZC4H2Q9NQZ6 224 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 IDI2-AS1Q9NZ38 188 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 KCNIP1Q9NZI2 227 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 OPN4Q9UHM6 478 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 JPT1Q9UK76 154 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 VSIG4Q9Y279 399 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 ABCA1O95477 2261 aa3.68□□□□□ -1.82
CSMD3-205ENST00000462254 PLXNB1O43157 2135 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 A0A1W2PS18 150 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 ITGB1BP1O14713 200 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 SLC31A2O15432 143 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 YPEL1O60688 119 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 HSBP1O75506 76 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 TSHBP01222 138 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 IFNA6P05013 189 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 CTXN2P0C2S0 81 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV1-8P0DP01 117 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 USF1P22415 310 aaPredicted RBP3.67□□□□□ -1.82
CSMD3-205ENST00000462254 ZBTB25P24278 435 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 NFYBP25208 207 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 CEACAM6P40199 344 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 GNG10P50151 68 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 XGP55808 180 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 LINC00205P59089 165 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 RPL8P62917 257 aaKnown RBP3.67□□□□□ -1.82
CSMD3-205ENST00000462254 PRB3Q04118 309 aaPredicted RBP3.67□□□□□ -1.82
CSMD3-205ENST00000462254 KLRD1Q13241 179 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 MORN2Q502X0 79 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 PLET1Q6UQ28 207 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 PRSS57Q6UWY2 283 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 HEPN1Q6WQI6 88 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 ZNF818PQ6ZRF7 136 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 Q8N7P7 452 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 ZDHHC22Q8N966 263 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 MAPK1IP1LQ8NDC0 245 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 WFDC11Q8NEX6 87 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 OR10J5Q8NHC4 309 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 TERB2Q8NHR7 220 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 CAPSLQ8WWF8 208 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 LEAP2Q969E1 77 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 TOMM40LQ969M1 308 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 TMEM230Q96A57 120 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 CREB3L1Q96BA8 519 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 FAM218AQ96MZ4 157 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 YPEL2Q96QA6 119 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 RNF2Q99496 336 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 GINS4Q9BRT9 223 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 MARVELD1Q9BSK0 173 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 MAP1LC3CQ9BXW4 147 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 OR2S2Q9NQN1 319 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 MMP26Q9NRE1 261 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 ZNRD1Q9P1U0 126 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 SCP2D1Q9UJQ7 156 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 NUBP2Q9Y5Y2 271 aa3.67□□□□□ -1.82
CSMD3-205ENST00000462254 TNCP24821 2201 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 ITPR3Q14573 2671 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 RNF212BA8MTL3 300 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 RNASEK-C17orf49H0YIS7 233 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 M0R1W7 72 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 HSD17B6O14756 317 aa3.66□□□□□ -1.82
CSMD3-205ENST00000462254 ENSAO43768 121 aaKnown RBP3.66□□□□□ -1.82
CSMD3-205ENST00000462254 FOXH1O75593 365 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms