RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 MMP23AO75900 390 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 ZNF705DP0CH99 300 aaPredicted RBP12.33□□□□□ -0.44
C9orf78-204ENST00000461762 ZNF705BP0CI00 300 aaPredicted RBP12.33□□□□□ -0.44
C9orf78-204ENST00000461762 GNG4P50150 75 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 RANP62826 216 aaKnown RBP12.33□□□□□ -0.44
C9orf78-204ENST00000461762 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 C2orf83Q53S99 150 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 TPTE2P1Q5T6R2 138 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 TEX43Q6ZNM6 134 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 GAFA1Q96PS6 74 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 GCM1Q9NP62 436 aa12.33□□□□□ -0.44
C9orf78-204ENST00000461762 M0R143 59 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 TCAPO15273 167 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 RAB4AP20338 218 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 SLC25A48Q6ZT89 311 aaKnown RBP12.32□□□□□ -0.44
C9orf78-204ENST00000461762 ST6GALNAC3Q8NDV1 305 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 C19orf24Q9BVV8 132 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 DSPP15924 2871 aaKnown RBP12.32□□□□□ -0.44
C9orf78-204ENST00000461762 IGKV1-16P04430 117 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 OR5G3P0C626 314 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 CX3CL1P78423 397 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 PQLC2Q6ZP29 291 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 ASCL3Q9NQ33 180 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 OSTCQ9NRP0 149 aa12.32□□□□□ -0.44
C9orf78-204ENST00000461762 SNURFLB1AK76 121 aa12.31□□□□□ -0.44
C9orf78-204ENST00000461762 F2Z2F3 143 aa12.31□□□□□ -0.44
C9orf78-204ENST00000461762 GNG10P50151 68 aa12.31□□□□□ -0.44
C9orf78-204ENST00000461762 C20orf144Q9BQM9 153 aa12.31□□□□□ -0.44
C9orf78-204ENST00000461762 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
C9orf78-204ENST00000461762 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
C9orf78-204ENST00000461762 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 TM4SF5O14894 197 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 IGLV2-8P01709 118 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 GATA2P23769 480 aaPredicted RBP12.3□□□□□ -0.44
C9orf78-204ENST00000461762 MLANAQ16655 118 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 TMEM30BQ3MIR4 351 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 TDRG1Q3Y452 100 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 ZNF788Q6ZQV5 615 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 OR1L8Q8NGR8 309 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 CCL13Q99616 98 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 PCNX2A6NKB5 2137 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
C9orf78-204ENST00000461762 BAGE3Q86Y29 109 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 BAGE2Q86Y30 109 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 DEFB108BQ8NET1 73 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 OR5AU1Q8NGC0 362 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 ATG101Q9BSB4 218 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 BET1LQ9NYM9 111 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 SPENQ96T58 3664 aaKnown RBP12.3□□□□□ -0.44
C9orf78-204ENST00000461762 LOC400499M0QZD8 3231 aa12.3□□□□□ -0.44
C9orf78-204ENST00000461762 ISLRO14498 428 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 IGHV1-46P01743 117 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 TOMM20LQ6UXN7 152 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 DOLPP1Q86YN1 238 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 OR5B3Q8NH48 314 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 SLC25A33Q9BSK2 321 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
C9orf78-204ENST00000461762 A0A1W2PRE2 83 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 CDKN1AP38936 164 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 TDGF1P3P51864 188 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 TAS2R45P59539 299 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 TNFAIP6P98066 277 aaPredicted RBP12.29□□□□□ -0.44
C9orf78-204ENST00000461762 TIGITQ495A1 244 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 WDR73Q6P4I2 378 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 TMEM136Q6ZRR5 245 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 FAM216BQ8N7L0 139 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 OR9G1Q8NH87 305 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 ZNRD1Q9P1U0 126 aa12.29□□□□□ -0.44
C9orf78-204ENST00000461762 INTS1Q8N201 2190 aaKnown RBP12.29□□□□□ -0.44
C9orf78-204ENST00000461762 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
C9orf78-204ENST00000461762 OR7C2O60412 319 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 MT-ND6P03923 174 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 C8orf88P0DMB2 117 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 COMPP49747 757 aaPredicted RBP12.28□□□□□ -0.44
C9orf78-204ENST00000461762 PPOXP50336 477 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
C9orf78-204ENST00000461762 CD69Q07108 199 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 IGF2BP2-AS1Q96M15 143 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 PSMB11A5LHX3 300 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 CEACAM4O75871 244 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 GPX1P07203 203 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 SAA1P0DJI8 122 aaPredicted RBP12.28□□□□□ -0.44
C9orf78-204ENST00000461762 DEFB109BQ30KR1 87 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 COX19Q49B96 90 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
C9orf78-204ENST00000461762 DSCAMO60469 2012 aa12.27□□□□□ -0.44
C9orf78-204ENST00000461762 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.44
C9orf78-204ENST00000461762 FTH1P19P0C7X4 201 aa12.27□□□□□ -0.44
C9orf78-204ENST00000461762 RPL19P84098 196 aaKnown RBP12.27□□□□□ -0.44
C9orf78-204ENST00000461762 TEX36Q5VZQ5 186 aa12.27□□□□□ -0.44
C9orf78-204ENST00000461762 ZNF833PQ6ZTB9 187 aa12.27□□□□□ -0.44
C9orf78-204ENST00000461762 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms