RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 WASHC3Q9Y3C0 194 aa13.52□□□□□ -0.24
CCDC43-202ENST00000457422 KLRB1Q12918 225 aa13.52□□□□□ -0.25
CCDC43-202ENST00000457422 CST9LP1Q5W188 147 aa13.52□□□□□ -0.25
CCDC43-202ENST00000457422 OR51G1Q8NGK1 321 aa13.52□□□□□ -0.25
CCDC43-202ENST00000457422 SPTA1P02549 2419 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 A0A1W2PN81 502 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 LYNX1G3V0Z9 82 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 H7BYZ3 331 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 IGLV2-23P01705 113 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 TRGC2P03986 189 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 LYNX1P0DP58 116 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 CHRNA7P36544 502 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 SPATA31B1PQ5VZV4 182 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 MOB3BQ86TA1 216 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 TGIF2LXQ8IUE1 241 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 MUC15Q8N387 334 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 OR10W1Q8NGF6 305 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 SLC35E1Q96K37 410 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 TMEM133Q9H2Q1 129 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BKO60814 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 CLN5O75503 358 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BJP06899 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HOXA5P20719 270 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BOP23527 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 IL3RAP26951 378 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 GCHFRP30047 84 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 MC5RP33032 325 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BBP33778 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BDP58876 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BCP62807 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 ERHP84090 104 aaKnown RBP13.51□□□□□ -0.25
CCDC43-202ENST00000457422 CD69Q07108 199 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST2H2BEQ16778 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.51□□□□□ -0.25
CCDC43-202ENST00000457422 CACNG8Q8WXS5 425 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BHQ93079 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BNQ99877 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 HIST1H2BMQ99879 126 aa13.51□□□□□ -0.25
CCDC43-202ENST00000457422 IGKV1OR2-108A0A075B7D4 117 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 DLL1O00548 723 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 PHOX2AO14813 284 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 MT-CO2P00403 227 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 GAMTQ14353 236 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 PNKDQ8N490 385 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 RALYQ9UKM9 306 aaKnown RBP13.5□□□□□ -0.25
CCDC43-202ENST00000457422 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
CCDC43-202ENST00000457422 CD99P14209 185 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
CCDC43-202ENST00000457422 ZNF672Q499Z4 452 aaPredicted RBP13.49□□□□□ -0.25
CCDC43-202ENST00000457422 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 OR5B12Q96R08 314 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 TMEM204Q9BSN7 226 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 NDUFB4O95168 129 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 COL8A2P25067 703 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 S100PP25815 95 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 GALR1P47211 349 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 CDSNQ15517 529 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 HLA-DRB5Q30154 266 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 ZNF841Q6ZN19 808 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
CCDC43-202ENST00000457422 CGB1A6NKQ9 187 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 E7EUB6 86 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 IGHV2-70P01814 119 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 S100A9P06702 114 aaKnown RBP13.48□□□□□ -0.25
CCDC43-202ENST00000457422 CDX1P47902 265 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-202ENST00000457422 PPOXP50336 477 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 ADORA2A-AS1P86434 159 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 ZNF430Q9H8G1 570 aaPredicted RBP13.48□□□□□ -0.25
CCDC43-202ENST00000457422 SRD5A3Q9H8P0 318 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 FUT9Q9Y231 359 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
CCDC43-202ENST00000457422 LGALS7P47929 136 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 VMA21Q3ZAQ7 101 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 FAM78BQ5VT40 261 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
CCDC43-202ENST00000457422 NECAP1Q8NC96 275 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 DERL1Q9BUN8 251 aa13.48□□□□□ -0.25
CCDC43-202ENST00000457422 RBP4P02753 201 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 OR10J1P30954 320 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
CCDC43-202ENST00000457422 DLX1P56177 255 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 NDUFA6P56556 154 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 MLANAQ16655 118 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 OR4P4Q8NGL7 312 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 RNASEH2CQ8TDP1 164 aaKnown RBP13.47□□□□□ -0.25
CCDC43-202ENST00000457422 FRZBQ92765 325 aa13.47□□□□□ -0.25
CCDC43-202ENST00000457422 IGHV2-26A0A0B4J1V2 119 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 PCP4L1A6NKN8 68 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 FOXH1O75593 365 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 IGLV1-47P01700 117 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 OR5G3P0C626 314 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 TRGC1P0CF51 173 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 AREGP15514 252 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 MIR17HGQ75NE6 70 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 C11orf52Q96A22 123 aa13.46□□□□□ -0.25
CCDC43-202ENST00000457422 CHODLQ9H9P2 273 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms