RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	NUDT15	Q9NV35	164 aa		9.84	□□□□□ -0.83
SNHG17-208	ENST00000456953	COA4	Q9NYJ1	87 aa		9.84	□□□□□ -0.83
SNHG17-208	ENST00000456953	DNAH2	Q9P225	4427 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	TRAV6	A0A075B6T7	132 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	C2orf70	A6NJV1	201 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	RBMXL2	O75526	392 aa	Known RBP	9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	PTTG1	O95997	202 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	RRAS	P10301	218 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	VAMP1	P23763	118 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	F2R	P25116	425 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	RPS16	P62249	146 aa	Known RBP	9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	RPL30	P62888	115 aa	Known RBP	9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	EIF4EBP1	Q13541	118 aa	Predicted RBP	9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	PLET1	Q6UQ28	207 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953		Q6ZWC4	215 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	SPAG16	Q8N0X2	631 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	ADAD2	Q8NCV1	583 aa	Known RBP	9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	OR4S2	Q8NH73	311 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	CD300LF	Q8TDQ1	290 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	PHLDA1	Q8WV24	401 aa	Predicted RBP	9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	FLVCR2	Q9UPI3	526 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	KCNIP3	Q9Y2W7	256 aa		9.83	□□□□□ -0.84
SNHG17-208	ENST00000456953	MUC4	Q99102	2169 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	C3orf85	A0A1B0GTC6	90 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	SPRY2	O43597	315 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	CRYZL1	O95825	349 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	SERPINE2	P07093	398 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	H2AFB2	P0C5Z0	115 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	ANXA7	P20073	488 aa	Known RBP	9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	PJVK	Q0ZLH3	352 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	OR52B4	Q8NGK2	314 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	NAA60	Q9H7X0	242 aa		9.82	□□□□□ -0.84
SNHG17-208	ENST00000456953	CRYM-AS1	A6NIL9	109 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	FAM223B	A6NKX1	122 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	SHOX	O15266	292 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	B3GALNT1	O75752	331 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	ANXA3	P12429	323 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	APOC4	P55056	127 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	EXOSC2	Q13868	293 aa	Known RBP	9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	TRIM16L	Q309B1	348 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	ANKRD55	Q3KP44	614 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	SP6	Q3SY56	376 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	C4orf46	Q504U0	113 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	TMEM128	Q5BJH2	165 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	SLC25A42	Q86VD7	318 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	FAM223A	Q8IWN6	122 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	DUSP18	Q8NEJ0	188 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	TMEM230	Q96A57	120 aa		9.81	□□□□□ -0.84
SNHG17-208	ENST00000456953	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	RBFOX2	O43251	390 aa	Known RBP eCLIP	9.8	□□□□□ -0.84	9e-17	■■■■■ 31.6
SNHG17-208	ENST00000456953	OR5AC1	P0C628	307 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	LPAR6	P43657	344 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	UBE2M	P61081	183 aa	Known RBP	9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	ERVK-16	P61578	105 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	RHOG	P84095	191 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	PRR20E	P86478	221 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	PRR20C	P86479	221 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	PRR20D	P86480	221 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	PRR20B	P86481	221 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	PRR20A	P86496	221 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	DHODH	Q02127	395 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	ATP5G2	Q06055	141 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	DEFB135	Q30KP9	77 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	FAM209B	Q5JX69	171 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	TMEM61	Q8N0U2	210 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	OSR1	Q8TAX0	266 aa	Predicted RBP	9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	HARBI1	Q96MB7	349 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	TP53RK	Q96S44	253 aa		9.8	□□□□□ -0.84
SNHG17-208	ENST00000456953	INMT-MINDY4	F8WBC2	141 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	LGALS9	O00182	355 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	UBE2C	O00762	179 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	SFT2D2	O95562	160 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	HPRT1	P00492	218 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	HRAS	P01112	189 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	IGLV2-23	P01705	113 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	HLA-A	P01891	365 aa	Known RBP	9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	CRYGB	P07316	175 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	OR4E1	P0C645	316 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	OR9G9	P0C7N8	305 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	EDN2	P20800	178 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	CBLN1	P23435	193 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	PPP1R1A	Q13522	171 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	TMEM177	Q53S58	311 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	LINC00336	Q6ZUF6	198 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	PHB2	Q99623	299 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	AIFM2	Q9BRQ8	373 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	PLEKHA2	Q9HB19	425 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	FAM212B	Q9NTI7	297 aa	Predicted RBP	9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	DNAH11	Q96DT5	4516 aa		9.79	□□□□□ -0.84
SNHG17-208	ENST00000456953	DNAH17	Q9UFH2	4485 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	TRBV9	A0A0B4J1U6	114 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	ATG12	O94817	140 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	S1PR2	O95136	353 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	DHFR	P00374	187 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	APELA	P0DMC3	54 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	UCP1	P25874	307 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	BRWD1-AS2	P59051	145 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	SRPX	P78539	464 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	VMA21	Q3ZAQ7	101 aa		9.78	□□□□□ -0.84
SNHG17-208	ENST00000456953	ZNF585B	Q52M93	769 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 148 ms