RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SAMD5Q5TGI4 173 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 SEPSECSQ9HD40 501 aaKnown RBP4.45□□□□□ -1.7
CSMD3-204ENST00000455883 HIGD1CA8MV81 97 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF883P0CG24 379 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 LYL1P12980 280 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 CXCL2P19875 107 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 FGF8P55075 233 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-204ENST00000455883 GPR146Q96CH1 333 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 DLL3Q9NYJ7 618 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 GZMMP51124 257 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-204ENST00000455883 PSG6Q00889 435 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 GLMPQ8WWB7 406 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 PPDPFLQ8WWR9 84 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 TRGV11A0A075B6L2 103 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 NDUFC2O95298 119 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF250P15622 560 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 KLRB1Q12918 225 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 DCAF10Q5QP82 559 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 GLRX5Q86SX6 157 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 FGF11Q92914 225 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 B9A039 149 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 TMPRSS2O15393 492 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF793Q6ZN11 406 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 RASL10BQ96S79 203 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 CACNG4Q9UBN1 327 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 C5orf67F2Z3F1 127 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ERVH48-1M5A8F1 160 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF585BQ52M93 769 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 KLF17Q5JT82 389 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-204ENST00000455883 FGFRL1Q8N441 504 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 OR11H6Q8NGC7 330 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 KLF12Q9Y4X4 402 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 CTGFP29279 349 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 P2RY4P51582 365 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF441Q8N8Z8 693 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ISOC2Q96AB3 205 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF488Q96MN9 340 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 JMJD8Q96S16 334 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 RNF115Q9Y4L5 304 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 PRSS53Q2L4Q9 553 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 NUDT8Q8WV74 236 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 LOC102724200A0A096LPH7 203 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-204ENST00000455883 FOXH1O75593 365 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 CEACAM4O75871 244 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 MALP21145 153 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 TIMP3P35625 211 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 TNXAQ16473 311 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 CRISPLD2Q9H0B8 497 aa4.45□□□□□ -1.7
CSMD3-204ENST00000455883 TRAV8-2A0A0B4J237 113 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 MEX3AA1L020 520 aaKnown RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 GCHFRP30047 84 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 DUSP14O95147 198 aaKnown RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 GLRXP35754 106 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 CKS1BP61024 79 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 OTPQ5XKR4 325 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF683Q8IZ20 524 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 LRRC61Q9BV99 259 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 C16orf97H3BN30 126 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 BGLAPP02818 100 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 Q0VG73 95 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 LAGE3Q14657 143 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ASPHD2Q6ICH7 369 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 LYZL2Q7Z4W2 148 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 GAGE12BA1L429 117 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 M0R1B8 84 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 H2BFSP57053 126 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SP6Q3SY56 376 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF562Q6V9R5 426 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 RNF152Q8N8N0 203 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF479Q96JC4 524 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ONECUT1Q9UBC0 465 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SLC25A15Q9Y619 301 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ARSAP15289 507 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SSBP2P81877 361 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 RUNX1Q01196 453 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 CLEC7AQ9BXN2 247 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 TMEM160Q9NX00 188 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 TNFRSF18Q9Y5U5 241 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 LINC00312Q9Y6C7 94 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 C22orf46C9J442 243 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 YPEL1O60688 119 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SLC25A16P16260 332 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 C1orf61Q13536 156 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SSMEM1Q8WWF3 244 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 YPEL2Q96QA6 119 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SIRT4Q9Y6E7 314 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 R4GN57 208 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 LTBP1Q14766 1721 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 FABP5P3A8MUU1 101 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 RHODO00212 210 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ZG16O60844 167 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 NPPCP23582 126 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
CSMD3-204ENST00000455883 ZNF415Q09FC8 603 aa4.44□□□□□ -1.7
CSMD3-204ENST00000455883 MAJINQ3KP22 176 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms